Evidence map›Paper›PMID 36153380›Full record

ArticleCommunications biology2022

A recessive mutation in muscadine grapes causes berry color-loss without influencing anthocyanin pathway.

Ahmed Ismail, Pranavkumar Gajjar, Minkyu Park, Abdulla Mahboob, Violeta Tsolova, Jayasankar Subramanian, Ahmed G Darwish, Islam El-Sharkawy

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Ahmed Ismail *Center for Viticulture and Small Fruit Research, College of Agriculture and Food Sciences, Florida A&M University, Tallahassee, FL, 32308, USA.
Pranavkumar Gajjar *Center for Viticulture and Small Fruit Research, College of Agriculture and Food Sciences, Florida A&M University, Tallahassee, FL, 32308, USA.ORCID 0000-0002-1535-371X
Minkyu ParkCenter for Viticulture and Small Fruit Research, College of Agriculture and Food Sciences, Florida A&M University, Tallahassee, FL, 32308, USA.
Abdulla MahboobDepartment of Chemistry, College of Sciences, United Arab Emirates University, Al-Ain, P.O. Box 15551, United Arab Emirates.
Violeta TsolovaCenter for Viticulture and Small Fruit Research, College of Agriculture and Food Sciences, Florida A&M University, Tallahassee, FL, 32308, USA.ORCID 0000-0002-8995-1923
Jayasankar SubramanianDepartment of Plant Agriculture, University of Guelph, P.O. Box 7000, Vineland Station, ON, L0R 2E0, Canada.
Ahmed G DarwishCenter for Viticulture and Small Fruit Research, College of Agriculture and Food Sciences, Florida A&M University, Tallahassee, FL, 32308, USA. ahmed.darwish@famu.edu.ORCID 0000-0001-5994-563X
Islam El-SharkawyCenter for Viticulture and Small Fruit Research, College of Agriculture and Food Sciences, Florida A&M University, Tallahassee, FL, 32308, USA. islam.elsharkawy@famu.edu.ORCID 0000-0002-0303-5538
Florida Agricultural and Mechanical University · USDamanhour University · EGUnited Arab Emirates University · AEUniversity of Guelph · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Anthocyanins, a major class of flavonoids, are important pigments of grape berries. Despite the recent discovery of the genetic cause underlying the loss of color, the metabolomic and molecular responses are unknown. Anthocyanin quantification among diverse berry color muscadines suggests that all genotypes could produce adequate anthocyanin quantities, irrespective of berry color. Transcriptome profiling of contrasting color muscadine genotypes proposes a potential deficiency that occurs within the anthocyanin transport and/or degradation mechanisms and might cause unpigmented berries. Genome-wide association studies highlighted a region on chromosome-4, comprising several genes encoding glutathione S-transferases involved in anthocyanin transport. Sequence comparison among genotypes reveals the presence of two GST4b alleles that differ by substituting the conserved amino acid residue Pro

Indexed as

AnthocyaninsVitisAmino AcidsFlavonoidsFruitGenome-Wide Association StudyGlutathioneMutationTransferasesAmino AcidsAnthocyaninsFlavonoidsGlutathioneTransferases

Identifiers

PMID36153380
PMCPMC9509324
OpenAlexW4296941691

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.