Evidence map›Paper›PMID 36153343›Full record

ArticleNature communications2022

Synthetic neuromorphic computing in living cells.

Luna Rizik, Loai Danial, Mouna Habib, Ron Weiss, Ramez Daniel

Abstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Why cellular computations challenge our design principles.Seminars in cell & developmental biology · 2025
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. SemiSynBio: A new era for neuromorphic computing.Synthetic and systems biotechnology · 2024
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Luna Rizik *Department of Biomedical Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.
Loai Danial *Andrew and Erna Viterbi Faculty of Electrical Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.
Mouna Habib *Department of Biomedical Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.
Ron WeissSynthetic Biology Center, Massachusetts Institute of Technology, Cambridge, MA, USA.ORCID 0000-0003-0396-2443
Ramez DanielDepartment of Biomedical Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel. ramizda@bm.technion.ac.il.ORCID 0000-0001-8886-3668

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Computational properties of neuronal networks have been applied to computing systems using simplified models comprising repeated connected nodes, e.g., perceptrons, with decision-making capabilities and flexible weighted links. Analogously to their revolutionary impact on computing, neuro-inspired models can transform synthetic gene circuit design in a manner that is reliable, efficient in resource utilization, and readily reconfigurable for different tasks. To this end, we introduce the perceptgene, a perceptron that computes in the logarithmic domain, which enables efficient implementation of artificial neural networks in Escherichia coli cells. We successfully modify perceptgene parameters to create devices that encode a minimum, maximum, and average of analog inputs. With these devices, we create multi-layer perceptgene circuits that compute a soft majority function, perform an analog-to-digital conversion, and implement a ternary switch. We also create a programmable perceptgene circuit whose computation can be modified from OR to AND logic using small molecule induction. Finally, we show that our approach enables circuit optimization via artificial intelligence algorithms.

Indexed as

Artificial IntelligenceNeural Networks, ComputerAlgorithmsEscherichia coliLogicNeurons

Identifiers

PMID36153343
PMCPMC9509348

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.