Evidence map›Paper›PMID 36151427›Full record

ArticleJournal of cancer research and clinical oncology2023

Prediction of TTF-1 expression in non-small-cell lung cancer using machine learning-based radiomics.

Ruijie Zhang, Xiankai Huo, Qian Wang, Juntao Zhang, Shaofeng Duan, Quan Zhang, Shicai Zhang

Open access · greenAbstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ruijie ZhangDepartment of Radiology and Tianjin Key Laboratory of Functional Imaging, Tianjin Medical University General Hospital, Tianjin, 300052, China.ORCID http://orcid.org/0000-0002-7293-9653
Xiankai HuoDepartment of Radiology, Qilu Hospital of Shandong University Dezhou Hospital, Dezhou, 253000, Shandong, China.
Qian WangDepartment of Radiology, Qilu Hospital of Shandong University Dezhou Hospital, Dezhou, 253000, Shandong, China.
Juntao ZhangPrecision Health Institution, GE Healthcare, Pudong new town, Shanghai, 210000, China.
Shaofeng DuanPrecision Health Institution, GE Healthcare, Pudong new town, Shanghai, 210000, China.
Quan ZhangDepartment of Radiology and Tianjin Key Laboratory of Functional Imaging, Tianjin Medical University General Hospital, Tianjin, 300052, China. quanzhang@tmu.edu.cn.
Shicai ZhangDepartment of Radiology, Qilu Hospital of Shandong University Dezhou Hospital, Dezhou, 253000, Shandong, China. zscrad@126.com.ORCID http://orcid.org/0000-0001-9414-9794
Qilu Hospital of Shandong University · CNTianjin Medical University General Hospital · CN

Funding

The Shandong Medical and Health Science Technology Development Project 202009011360
6 · The paper itself

Abstract

purposeTo explore the feasibility and performance of machine learning-based radiomics models in predicting thyroid transcription factor-1 (TTF-1) expression in non-small cell lung cancer (NSCLC).

methodsA total of 227 NSCLC patients were included in this retrospective study and divided into the training set and test set with a ratio of 8:2 randomly. Lung tumors on CT images were semi-automatic segmented utilizing 3D Slicer. Radiomic features quantifying tumor intensity, shape, texture, and transformed wavelet were extracted using a Python toolkit. Variance threshold (VT), principal component analysis (PCA), and least absolute shrinkage selection operator (LASSO) were used to reduce features; logistic regression (LR), random forest (RF), and support vector machine (SVM) were used to develop classifier, respectively. The performance of the models was evaluated by areas under the curves (AUC) of receiver operating characteristic (ROC) curves. Different models were compared by the Delong test to determine the optimal algorithms.

resultsTotal 1968 radiomic features were extracted from the lung tumors images, and then 13, 15, and 13 stable features were selected by VT, PCA, and LASSO, respectively. Each classifier could discriminate against the TTF-1-positive groups with average AUC ranging from 0.601 to 0.784 in the training set. Among the models, three models constructed by the LASSO method showed satisfactory performance in the test set with AUC ranging from 0.715 to 0.787. The Delong test showed no significant difference between the LASSO models (P > 0.05).

conclusionMachine learning-based radiomics model could predict the expression of TTF-1 in NSCLC patients.

Indexed as

Carcinoma, Non-Small-Cell LungLung NeoplasmsAlgorithmsHumansMachine LearningRetrospective StudiesImmunohistochemistryMachine learningNon-small-cell lungPredictionTTF-1

Identifiers

PMID36151427
PMCPMC11797328
OpenAlexW4296844050

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.