Evidence map›Paper›PMID 36151405›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2022

Genome-wide association mapping of septoria nodorum blotch resistance in Nordic winter and spring wheat collections.

Min Lin, Andrea Ficke, Jon Arne Dieseth, Morten Lillemo

Open access · hybridAbstract read
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Min LinDepartment of Plant Sciences, Norwegian University of Life Sciences, Post Box 5003, NO-1432, ÅS, Norway.ORCID http://orcid.org/0000-0002-9209-3819
Andrea FickeDivision of Biotechnology and Plant Health, Norwegian Inst. of Bioeconomy Research, P.O. Box 115, NO-1431, ÅS, Norway.ORCID http://orcid.org/0000-0002-3438-3842
Jon Arne DiesethGraminor, AS, Bjørke Gård, Hommelstadvegen 60, NO-2322, Ridabu, Norway.
Morten LillemoDepartment of Plant Sciences, Norwegian University of Life Sciences, Post Box 5003, NO-1432, ÅS, Norway. morten.lillemo@nmbu.no.ORCID http://orcid.org/0000-0002-8594-8794
Norwegian University of Life Sciences · NOGraminor (Norway) · NONorwegian Institute of Bioeconomy Research · NO

Funding

Norges Forskningsråd grant NFR251894
6 · The paper itself

Abstract

key messageA new QTL for SNB, QSnb.nmbu-2AS, was found in both winter and spring wheat panels that can greatly advance SNB resistance breeding Septoria nodorum blotch (SNB), caused by the necrotrophic fungal pathogen Parastagonospora nodorum, is the dominant leaf blotch pathogen of wheat in Norway. Resistance/susceptibility to SNB is a quantitatively inherited trait, which can be partly explained by the interactions between wheat sensitivity loci (Snn) and corresponding P. nodorum necrotrophic effectors (NEs). Two Nordic wheat association mapping panels were assessed for SNB resistance in the field over three to four years: a spring wheat and a winter wheat panel (n = 296 and 102, respectively). Genome-wide association studies found consistent SNB resistance associated with quantitative trait loci (QTL) on eleven wheat chromosomes, and ten of those QTL were common in the spring and winter wheat panels. One robust QTL on the short arm of chromosome 2A, QSnb.nmbu-2AS, was significantly detected in both the winter and spring wheat panels. For winter wheat, using the four years of SNB field severity data in combination with five years of historical data, the effect of QSnb.nmbu-2AS was confirmed in seven of the nine years, while for spring wheat, the effect was confirmed for all tested years including the historical data from 2014 to 2015. However, lines containing the resistant haplotype are rare in both Nordic spring (4.0%) and winter wheat cultivars (15.7%), indicating the potential of integrating this QTL in SNB resistance breeding programs. In addition, clear and significant additive effects were observed by stacking resistant alleles of the detected QTL, suggesting that marker-assisted selection can greatly facilitate SNB resistance breeding.

Indexed as

Genome-Wide Association StudyPlant DiseasesAscomycotaChromosome MappingDisease ResistancePhenotypePlant Breeding

Identifiers

PMID36151405
PMCPMC9734210
OpenAlexW4297089376

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.