Evidence map›Paper›PMID 36151130›Full record

ArticleScientific reports2022

FathomNet: A global image database for enabling artificial intelligence in the ocean.

Kakani Katija, Eric Orenstein, Brian Schlining, Lonny Lundsten, Kevin Barnard, Giovanna Sainz, Oceane Boulais, Megan Cromwell, Erin Butler, Benjamin Woodward and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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  15. A synergistic future for AI and ecology.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kakani KatijaMonterey Bay Aquarium Research Institute, Research and Development, Moss Landing, 95039, USA. kakani@mbari.org.
Eric OrensteinMonterey Bay Aquarium Research Institute, Research and Development, Moss Landing, 95039, USA.
Brian SchliningMonterey Bay Aquarium Research Institute, Research and Development, Moss Landing, 95039, USA.
Lonny LundstenMonterey Bay Aquarium Research Institute, Research and Development, Moss Landing, 95039, USA.
Kevin BarnardMonterey Bay Aquarium Research Institute, Research and Development, Moss Landing, 95039, USA.
Giovanna SainzMonterey Bay Aquarium Research Institute, Research and Development, Moss Landing, 95039, USA.
Oceane BoulaisNOAA, Southeast Fisheries Science Center, Key Biscayne, 33149, USA.
Megan CromwellNOAA, National Centers for Environmental Information, Stennis Space Center, St. Louis, 39529, USA.
Erin ButlerCVision AI Inc., Research and Development, Medford, 02155, USA.
Benjamin WoodwardCVision AI Inc., Research and Development, Medford, 02155, USA.
Katherine L C BellOcean Discovery League, Saunderstown, 02874, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ocean is experiencing unprecedented rapid change, and visually monitoring marine biota at the spatiotemporal scales needed for responsible stewardship is a formidable task. As baselines are sought by the research community, the volume and rate of this required data collection rapidly outpaces our abilities to process and analyze them. Recent advances in machine learning enables fast, sophisticated analysis of visual data, but have had limited success in the ocean due to lack of data standardization, insufficient formatting, and demand for large, labeled datasets. To address this need, we built FathomNet, an open-source image database that standardizes and aggregates expertly curated labeled data. FathomNet has been seeded with existing iconic and non-iconic imagery of marine animals, underwater equipment, debris, and other concepts, and allows for future contributions from distributed data sources. We demonstrate how FathomNet data can be used to train and deploy models on other institutional video to reduce annotation effort, and enable automated tracking of underwater concepts when integrated with robotic vehicles. As FathomNet continues to grow and incorporate more labeled data from the community, we can accelerate the processing of visual data to achieve a healthy and sustainable global ocean.

Indexed as

Artificial IntelligenceMachine LearningAnimalsBiotaDatabases, FactualOceans and Seas

Identifiers

PMID36151130
PMCPMC9508077

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.