Evidence map›Paper›PMID 36150122›Full record

ArticleGeobiology2023

Production of diverse brGDGTs by Acidobacterium Solibacter usitatus in response to temperature, pH, and O

Toby A Halamka, Jonathan H Raberg, Jamie M McFarlin, Adam D Younkin, Christopher Mulligan, Xiao-Lei Liu, Sebastian H Kopf

Abstract read
In one paragraph

Article in Geobiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Identification ofApplied and environmental microbiology · 2026
    Article
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  7. Tropical Andean climate variations since the last deglaciation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Nitrogen and sulfur for phosphorus: Lipidome adaptation of anaerobic sulfate-reducing bacteria in phosphorus-deprived conditions.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Multi-molecularPhilosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2023
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Toby A HalamkaDepartment of Geological Sciences, University of Colorado Boulder, Denver, CO, USA.ORCID 0000-0002-3551-965X
Jonathan H RabergDepartment of Geological Sciences, University of Colorado Boulder, Denver, CO, USA.ORCID 0000-0003-2959-3631
Jamie M McFarlinDepartment of Geological Sciences, University of Colorado Boulder, Denver, CO, USA.ORCID 0000-0002-8185-8185
Adam D YounkinDepartment of Geological Sciences, University of Colorado Boulder, Denver, CO, USA.
Christopher MulliganDepartment of Geological Sciences, University of Colorado Boulder, Denver, CO, USA.
Xiao-Lei LiuSchool of Geosciences, University of Oklahoma, Norman, Oklahoma, USA.ORCID 0000-0002-0218-3029
Sebastian H KopfDepartment of Geological Sciences, University of Colorado Boulder, Denver, CO, USA.ORCID 0000-0002-2044-0201

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are bacterial membrane lipids that are frequently employed as paleoenvironmental proxies because of the strong empirical correlations between their relative abundances and environmental temperature and pH. Despite the ubiquity of brGDGTs in modern and paleoenvironments, the source organisms of these enigmatic compounds have remained elusive, requiring paleoenvironmental applications to rely solely on observed environmental correlations. Previous laboratory and environmental studies have suggested that the globally abundant bacterial phylum of the Acidobacteria may be an important brGDGT producer in nature. Here, we report on experiments with a cultured Acidobacterium, Solibacter usitatus, that makes a large portion of its cellular membrane (24 ± 9% across all experiments) out of a structurally diverse set of tetraethers including the common brGDGTs Ia, IIa, IIIa, Ib, and IIb. Solibacter usitatus was grown across a range of conditions including temperatures from 15 to 30°C, pH from 5.0 to 6.5, and O

Indexed as

AcidobacteriaGlycerolArchaeaBacteriaHydrogen-Ion ConcentrationTemperatureGlycerolAcidobacteriabrGDGTspaleoclimate

Identifiers

PMID36150122
PMCPMC10087280

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.