Evidence map›Paper›PMID 36149943›Full record

ArticleScience immunology2022

Dysregulated stem cell niches and altered lymphocyte recirculation cause B and T cell lymphopenia in WHIM syndrome.

Sandra Zehentmeier, Vivian Y Lim, Yifan Ma, Julia Fossati, Takeshi Ito, Yawen Jiang, Alexei V Tumanov, Ho-Joon Lee, Lukas Dillinger, Jihyun Kim and 4 more

Open access · greenAbstract read
In one paragraph

Article in Science immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
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  7. Article
  8. Periodontal disease in patients with WHIM syndrome.Journal of clinical periodontology · 2024
    Article
  9. Review
  10. Article
  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 3 countries.

Sandra ZehentmeierDepartment of Immunobiology and Yale Stem Cell Center, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, USA.ORCID 0000-0001-6263-1535
Vivian Y LimDepartment of Immunobiology and Yale Stem Cell Center, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, USA.ORCID 0000-0002-2851-4391
Yifan MaDepartment of Immunobiology and Yale Stem Cell Center, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, USA.ORCID 0000-0002-1341-5059
Julia FossatiDepartment of Immunobiology and Yale Stem Cell Center, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, USA.ORCID 0000-0002-2667-8392
Takeshi ItoDepartment of Immunobiology and Yale Stem Cell Center, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, USA.ORCID 0000-0001-8061-910X
Yawen JiangDepartment of Immunobiology and Yale Stem Cell Center, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, USA.ORCID 0000-0003-2964-9367
Alexei V TumanovDepartment of Microbiology, Immunology and Molecular Genetics, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.ORCID 0000-0001-6042-0152
Ho-Joon LeeDepartment of Genetics and Yale Center for Genome Analysis, Yale University School of Medicine, 333 Cedar Street, New Haven, CT, USA.ORCID 0000-0003-3616-5387
Lukas DillingerX4 Pharmaceuticals Inc., Cambridge, MA, USA.
Jihyun KimBK21 Graduate Program, Department of Biomedical Sciences, Korea University College of Medicine, Seoul 02841, Republic of Korea.
Krisztian CsomosDivision of Allergy and Immunology, Department of Pediatrics, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.ORCID 0000-0002-9266-1089
Jolan E WalterDivision of Allergy and Immunology, Department of Pediatrics, Morsani College of Medicine, University of South Florida, Tampa, FL, USA.ORCID 0000-0002-6192-0703
Jungmin ChoiDepartment of Genetics and Yale Center for Genome Analysis, Yale University School of Medicine, 333 Cedar Street, New Haven, CT, USA.
João P PereiraDepartment of Immunobiology and Yale Stem Cell Center, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, USA.ORCID 0000-0002-5694-4938
Yale University · USKorea University · KRAVEO Oncology (United States) · USJohns Hopkins University · USThe University of Texas Health Science Center at San Antonio · USUniversity of South Florida · US

Funding

Cellular and molecular analysis of B lymphocyte development and selectionR01AI113040 · NIAID · YALE UNIVERSITY · PI JOAO PEREIRA · 2014 to 2026
$6.0M
Mechanisms of peripheral B cell differentiation and homeostasisR21AI133060 · NIAID · YALE UNIVERSITY · PI PEREIRA, JOAO · 2018 to 2019
$461k
Lymphopoietic niche editing by B-lineage leukemic cells and its implications for B cell progenitor and leukemic cell growthR21AI146648 · NIAID · YALE UNIVERSITY · PI PEREIRA, JOAO · 2019 to 2020
$461k
NIAID NIH HHS R01 AI113040NIAID NIH HHS R21 AI133060NIAID NIH HHS R21 AI146648
6 · The paper itself

Abstract

Gain-of-function (GOF) mutations in CXCR4 cause WHIM (warts, hypogammaglobulinemia, infections, and myelokathexis) syndrome, characterized by infections, leukocyte retention in bone marrow (BM), and blood leukopenias. B lymphopenia is evident at early progenitor stages, yet why do CXCR4 GOF mutations that cause B (and T) lymphopenia remain obscure? Using a CXCR4 R334X GOF mouse model of WHIM syndrome, we showed that lymphopoiesis is reduced because of a dysregulated mesenchymal stem cell (MSC) transcriptome characterized by a switch from an adipogenic to an osteolineage-prone program with limited lymphopoietic activity. We identify lymphotoxin beta receptor (LTβR) as a critical pathway promoting interleukin-7 (IL-7) down-regulation in MSCs. Blocking LTβR or CXCR4 signaling restored IL-7 production and B cell development in WHIM mice. LTβR blocking also increased production of IL-7 and B cell activating factor (BAFF) in secondary lymphoid organs (SLOs), increasing B and T cell numbers in the periphery. These studies revealed that LTβR signaling in BM MSCs and SLO stromal cells limits the lymphocyte compartment size.

Indexed as

Immunologic Deficiency SyndromesLymphopeniaAnimalsB-Cell Activating FactorInterleukin-7Lymphotoxin beta ReceptorMicePrimary Immunodeficiency DiseasesStem Cell NicheT-LymphocytesWartsB-Cell Activating FactorInterleukin-7Lymphotoxin beta Receptor

Identifiers

PMID36149943
PMCPMC9614684
OpenAlexW4297016153

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.