Evidence map›Paper›PMID 36148682›Full record

ArticleJournal of cell science2022

The AHR target gene scinderin activates the WNT pathway by facilitating the nuclear translocation of β-catenin.

Lizbeth Perez-Castro, Niranjan Venkateswaran, Roy Garcia, Yi-Heng Hao, M C Lafita-Navarro, Jiwoong Kim, Dagan Segal, Etai Saponzik, Bo-Jui Chang, Reto Fiolka and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of cell science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. AhR and Wnt/β-Catenin Signaling Pathways and Their Interplay.Current issues in molecular biology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Lizbeth Perez-CastroDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Niranjan VenkateswaranDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Roy GarciaDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Yi-Heng HaoDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.
M C Lafita-NavarroDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Jiwoong KimQuantitative Biomedical Research Center, Department of Population & Data Sciences, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Dagan SegalDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0003-0852-6501
Etai SaponzikLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Bo-Jui ChangLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Reto FiolkaLyda Hill Department of Bioinformatics, UT Southwestern Medical Center, Dallas, TX 75390, USA.
Gaudenz DanuserDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0001-8583-2014
Lin XuQuantitative Biomedical Research Center, Department of Population & Data Sciences, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Thomas BrabletzNikolaus-Fiebiger Center for Molecular Medicine, University Erlangen-Nurnberg, Erlangen 91054, Germany.
Maralice Conacci-SorrellDepartment of Cell Biology, UT Southwestern Medical Center, Dallas, TX 75390, USA.ORCID 0000-0002-4371-5087
Southwestern Medical Center · USFriedrich-Alexander-Universität Erlangen-Nürnberg · DEQuantitative BioSciences · US

Funding

Functional causality in regulating cell morphogenesisR35GM136428 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI DANUSER, GAUDENZ · 2020 to 2024
$4.1M
The kynurenine-AHR pathway in biomass production - Revision - 2R01CA245548 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI CONACCI-SORRELL, MARALICE · 2020 to 2024
$2.2M
Uncovering novel players in nucleolar organization and function - Equipment SupplementR01GM145744 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI CONACCI-SORRELL, MARALICE · 2022 to 2025
$1.6M
American Cancer Society 724003Cancer Prevention and Research Institute of TexasCancer Prevention and Research Institute of Texas RP220046Children's Cancer FundGeneral Medicine R01 GM145744-01NCI NIH HHS R01 CA245548NIGMS NIH HHS R01 GM145744NIGMS NIH HHS R35 GM136428Rally FoundationUniversity of Texas Southwestern Medical CenterWelch Foundation I-2058-20210327
6 · The paper itself

Abstract

The ligand-activated transcription factor aryl hydrocarbon receptor (AHR) regulates cellular detoxification, proliferation and immune evasion in a range of cell types and tissues, including cancer cells. In this study, we used RNA-sequencing to identify the signature of the AHR target genes regulated by the pollutant 2,3,7,8-tetrachlorodibenzodioxin (TCDD) and the endogenous ligand kynurenine (Kyn), a tryptophan-derived metabolite. This approach identified a signature of six genes (CYP1A1, ALDH1A3, ABCG2, ADGRF1 and SCIN) as commonly activated by endogenous or exogenous ligands of AHR in multiple colon cancer cell lines. Among these, the actin-severing protein scinderin (SCIN) was necessary for cell proliferation; SCIN downregulation limited cell proliferation and its expression increased it. SCIN expression was elevated in a subset of colon cancer patient samples, which also contained elevated β-catenin levels. Remarkably, SCIN expression promoted nuclear translocation of β-catenin and activates the WNT pathway. Our study identifies a new mechanism for adhesion-mediated signaling in which SCIN, likely via its ability to alter the actin cytoskeleton, facilitates the nuclear translocation of β-catenin. This article has an associated First Person interview with the first authors of the paper.

Indexed as

Colonic NeoplasmsEnvironmental PollutantsPolychlorinated DibenzodioxinsActinsbeta CateninCytochrome P-450 CYP1A1GelsolinHumansKynurenineLigandsReceptors, Aryl HydrocarbonRNATryptophanWnt Signaling PathwayActinsbeta CateninCytochrome P-450 CYP1A1Environmental PollutantsGelsolinKynurenineLigandsPolychlorinated DibenzodioxinsReceptors, Aryl HydrocarbonRNAscinderinTryptophanAryl hydrocarbon receptorColon cancerFICZKynurenineTCDD

Identifiers

PMID36148682
PMCPMC10658791
OpenAlexW4296803290

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.