Evidence map›Paper›PMID 36148415›Full record

ArticleOxidative medicine and cellular longevity2022

Identification of Key Genes and Pathways Associated with Oxidative Stress in Periodontitis.

Zheng Zhang, Youli Zheng, Xiaowei Bian, Minghui Wang, Jiashu Chou, Haifeng Liu, Zuomin Wang

Open access · hybridAbstract read
In one paragraph

Article in Oxidative medicine and cellular longevity, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 1 pooled it
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. [Mechanism underlying carvacrol-induced alveolar bone repair via the phosphatidylinositol 3-kinase pathway in periodontal disease].Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2026
    Article
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  6. IL-6Journal of translational medicine · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Therapeutic Potential of Extracellular Vesicles in Oral Inflammation.International journal of molecular sciences · 2025
    Review
  11. Article
  12. Journal of inflammation research · 2025
    Article
  13. Potential correlation between chronic periodontitis and Parkinson's disease.Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2024
    Article
  14. Review
  15. Effect ofInternational journal of molecular sciences · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Zheng ZhangTianjin Stomatological Hospital, School of Medicine, Nankai University, Tianjin 300000, China.ORCID https://orcid.org/0000-0002-6954-8790
Youli ZhengThe School and Hospital of Stomatology, Tianjin Medical University, Tianjin 300070, China.
Xiaowei BianThe School and Hospital of Stomatology, Tianjin Medical University, Tianjin 300070, China.
Minghui WangThe School and Hospital of Stomatology, Tianjin Medical University, Tianjin 300070, China.
Jiashu ChouTianjin Stomatological Hospital, School of Medicine, Nankai University, Tianjin 300000, China.
Haifeng LiuTianjin Stomatological Hospital, School of Medicine, Nankai University, Tianjin 300000, China.ORCID https://orcid.org/0000-0002-3917-1793
Zuomin WangDepartment of Stomatology, Beijing Chao-Yang Hospital, Capital Medical University, Beijing 100020, China.ORCID https://orcid.org/0000-0003-3722-377X
Tianjin Medical University · CNTianjin University · CNCapital Medical University · CNTianjin Stomatological Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methods: The differentially expressed genes (DEGs) were identified using periodontitis-related microarray from the GEO database, and OS-genes were extracted from GeneCards database. The intersection of the OS-genes and the DEGs was considered as oxidative stress-related DEGs (OS-DEGs) in periodontitis. The Pearson correlation and protein-protein interaction analyses were used to screen key OS-genes. Gene set enrichment, functional enrichment, and pathway enrichment analyses were performed in OS-genes. Based on key OS-genes, a risk score model was constructed through logistic regression, receiver operating characteristic curve, and stratified analyses. Results: In total, 74 OS-DEGs were found in periodontitis, including 65 upregulated genes and 9 downregulated genes. Six of them were identified as key OS-genes (CXCR4, SELL, FCGR3B, FCGR2B, PECAM1, and ITGAL) in periodontitis. All the key OS-genes were significantly upregulated and associated with the increased risk of periodontitis. Functional enrichment analysis showed that these genes were mainly associated with leukocyte cell-cell adhesion, phagocytosis, and cellular extravasation. Pathway analysis revealed that these genes were involved in several signaling pathways, such as leukocyte transendothelial migration and osteoclast differentiation. Conclusion: In this study, we screened six key OS-genes that were screened as risk factors of periodontitis. We also identified multiple signaling pathways that might play crucial roles in regulating oxidative stress damage in periodontitis. In the future, more experiments need to be carried out to validate our current findings.

Indexed as

Gene Expression ProfilingPeriodontitisComputational BiologyHumansMicroarray AnalysisOxidative Stress

Identifiers

PMID36148415
PMCPMC9489423
OpenAlexW4295836077

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.