Evidence map›Paper›PMID 36147311›Full record

ArticleACS bio & med chem Au2021

Identification of a BAZ2A Bromodomain Hit Compound by Fragment Joining.

Andrea Dalle Vedove, Giulia Cazzanelli, Jessica Corsi, Maria Sedykh, Vito Giuseppe D'Agostino, Amedeo Caflisch, Graziano Lolli

Open access · goldAbstract read
In one paragraph

Article in ACS bio & med chem Au, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 8 citations in OpenAlex.

  1. Unusual backfolded binding poses of BAZ2A bromodomain binders.Acta crystallographica. Section D, Structural biology · 2026
    Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Reevaluation of bromodomain ligands targeting BAZ2A.Protein science : a publication of the Protein Society · 2023
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Andrea Dalle VedoveDepartment of Cellular, Computational and Integrative Biology - CIBio, University of Trento, via Sommarive 9, 38123 Trento, Italy.
Giulia CazzanelliDepartment of Cellular, Computational and Integrative Biology - CIBio, University of Trento, via Sommarive 9, 38123 Trento, Italy.
Jessica CorsiDepartment of Cellular, Computational and Integrative Biology - CIBio, University of Trento, via Sommarive 9, 38123 Trento, Italy.
Maria SedykhDepartment of Biochemistry, University of Zürich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland.
Vito Giuseppe D'AgostinoDepartment of Cellular, Computational and Integrative Biology - CIBio, University of Trento, via Sommarive 9, 38123 Trento, Italy.
Amedeo CaflischDepartment of Biochemistry, University of Zürich, Winterthurerstrasse 190, CH-8057 Zürich, Switzerland.ORCID https://orcid.org/0000-0002-2317-6792
Graziano LolliDepartment of Cellular, Computational and Integrative Biology - CIBio, University of Trento, via Sommarive 9, 38123 Trento, Italy.ORCID https://orcid.org/0000-0002-8536-5599
University of Trento · ITUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The bromodomains of BAZ2A and BAZ2B (bromodomain adjacent to zinc finger domain proteins 2) are among the most hard to drug of the 61 human bromodomains. While little is known about the role of BAZ2B, there is strong evidence for the opportunity of targeting BAZ2A in various cancers. Here, a benzimidazole-triazole fragment that binds to the BAZ2A acetyl lysine pocket was identified by a molecular docking campaign and validated by competitive binding assays and X-ray crystallography. Another ligand was observed in close proximity by soaking experiments using the BAZ2A bromodomain preincubated with the benzimidazole-triazole fragment. The crystal structure of BAZ2A with the two ligands was employed to design a few benzimidazole-triazole derivatives with increased affinity. We also present the engineering of a BAZ2A bromodomain mutant for consistent, high-resolution crystallographic studies.

Identifiers

PMID36147311
PMCPMC9484724
OpenAlexW3180596629

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.