Evidence map›Paper›PMID 36146678›Full record

ArticleViruses2022

Selection and Characterization of Single-Stranded DNA Aptamers of Diagnostic Potential against the Whole Zika Virus.

Liliane Monteiro de Morais, Thiago Santos Chaves, Marco Alberto Medeiros, Kaique Alves Brayner Pereira, Patrícia Barbosa Jurgilas, Sheila Maria Barbosa de Lima, Sotiris Missailidis, Ana Maria Bispo de Filippis

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Liliane Monteiro de MoraisLaboratório de Tecnologia Virológica-LATEV, Instituto de Tecnologia em Imunobiológicos, Fundação Oswaldo Cruz-Fiocruz, Rio de Janeiro 22725, RJ, Brazil.
Thiago Santos ChavesLaboratório de Tecnologia Recombinante-LATER, Instituto de Tecnologia em Imunobiológicos, Fundação Oswaldo Cruz-Fiocruz, Rio de Janeiro 22725, RJ, Brazil.ORCID 0000-0002-9699-3320
Marco Alberto MedeirosVice-Diretoria de Desenvolvimento Tecnológico-VDTEC, Instituto de Tecnologia em Imunobiológicos, Fundação Oswaldo Cruz-Fiocruz, Rio de Janeiro 22725, RJ, Brazil.
Kaique Alves Brayner PereiraLaboratório de Macromoléculas-LAMAM, Instituto de Tecnologia em Imunobiológicos, Fundação Oswaldo Cruz-Fiocruz, Rio de Janeiro 22725, RJ, Brazil.
Patrícia Barbosa JurgilasLaboratório de Macromoléculas-LAMAM, Instituto de Tecnologia em Imunobiológicos, Fundação Oswaldo Cruz-Fiocruz, Rio de Janeiro 22725, RJ, Brazil.
Sheila Maria Barbosa de LimaLaboratório de Tecnologia Virológica-LATEV, Instituto de Tecnologia em Imunobiológicos, Fundação Oswaldo Cruz-Fiocruz, Rio de Janeiro 22725, RJ, Brazil.ORCID 0000-0001-9234-1678
Sotiris MissailidisVice-Diretoria de Desenvolvimento Tecnológico-VDTEC, Instituto de Tecnologia em Imunobiológicos, Fundação Oswaldo Cruz-Fiocruz, Rio de Janeiro 22725, RJ, Brazil.
Ana Maria Bispo de FilippisLaboratório de Flavivirus, Instituto Oswaldo Cruz, Fundação Oswaldo Cruz-Fiocruz, Rio de Janeiro 22725, RJ, Brazil.
Fundação Oswaldo Cruz · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zika virus became a major public health problem in early 2015, when cases of Guillain-Barré syndrome and microcephaly were associated with viral infection. Currently, ZIKV is endemic in all tropical areas of the world, and the chance for future Zika epidemics remains very real and accurate diagnosis is crucial. The aim of this work was to select specific ssDNA aptamers that bind to the entire Zika virus and can be used to compose specific diagnostics, without cross-reactivity with other flaviviruses. Zika virus was cultivated in Vero cells and used as a target for aptamer selection. Aptamers specific for the ZIKV were selected using whole-virus SELEX, with counterselection for other flavivirus. Secondary and tertiary structures were evaluated and the molecular anchoring between the aptamers and target were simulated by the HDOCK server. Aptamer interaction was evaluated by ELISA/ELASA and the dissociation constant (Kd) was calculated by thermophoresis. Four ZIKV-specific aptamers were selected. The best two were further characterized and proved to be specific for ZIKV. Aptamers are capable of binding specifically to the ZIKV and differentiate from Dengue virus. The aptamers selected in this work can be used as capture agents in the composition of diagnostic tests to specifically detect ZIKV infection.

Indexed as

FlavivirusZika VirusZika Virus InfectionAnimalsAntibodies, ViralChlorocebus aethiopsCross ReactionsDNA, Single-StrandedHumansVero CellsAntibodies, ViralDNA, Single-StrandedDNA aptamersmolecular docking simulationSELEX aptamer techniqueviral envelope proteinZika virus

Identifiers

PMID36146678
PMCPMC9504500
OpenAlexW4293724178

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.