Evidence map›Paper›PMID 36145450›Full record

ArticlePathogens (Basel, Switzerland)2022

Detection of Alpha- and Betacoronaviruses in Frugivorous and Insectivorous Bats in Nigeria.

Uwem George, Oluwadamilola George, Arthur Oragwa, Babatunde Motayo, Joshua Kamani, Andrew Adamu, Oluyomi Sowemimo, Richard Adeleke, Samson Abalaka, Nuhu Sani and 6 more

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 3 countries.

Uwem GeorgeAfrican Centre of Excellence for Genomics of Infectious Diseases, Redeemer's University, Ede 232102, Osun State, Nigeria.ORCID 0000-0001-5474-1048
Oluwadamilola GeorgeIbadan Diagnostic and Epidemiology Laboratory, National Veterinary Research Institute, Mokola, Ibadan 200212, Oyo State, Nigeria.
Arthur OragwaDepartment of Veterinary Microbiology, Faculty of Veterinary Medicine, University of Jos,Jos 930003, Plateau State, Nigeria.ORCID 0000-0002-4873-2089
Babatunde MotayoDepartment of Medical Microbiology, Federal Medical Centre, Abeokuta 110222, Ogun State, Nigeria.ORCID 0000-0002-9933-8751
Joshua KamaniParasitology Division, National Veterinary Research Institute (NVRI), PMB 01,Vom 930103, Plateau State, Nigeria.
Andrew AdamuAustralian Institute of Tropical Health and Medicine, Division of Tropical Health and Medicine,James Cook University, Townsville, QLD 4811, Australia.ORCID 0000-0003-3745-4439
Oluyomi SowemimoDepartment of Zoology, Faculty of Science, Obafemi Awolowo University, Ile Ife 220005, Osun State, Nigeria.ORCID 0000-0001-9222-8341
Richard AdelekeImmunology and Infectious Diseases, College of Veterinary Medicine, Cornell University, New York, NY 14853, USA.
Samson AbalakaDepartment of Veterinary Pathology, Faculty of Veterinary Medicine, University of Abuja,Abuja 900105, Federal Capital Territory, Nigeria.
Nuhu SaniDepartment of Veterinary Pathology, Faculty of Veterinary Medicine, University of Abuja,Abuja 900105, Federal Capital Territory, Nigeria.ORCID 0000-0002-6351-2535
Judith OguzieAfrican Centre of Excellence for Genomics of Infectious Diseases, Redeemer's University, Ede 232102, Osun State, Nigeria.
Philomena EromonAfrican Centre of Excellence for Genomics of Infectious Diseases, Redeemer's University, Ede 232102, Osun State, Nigeria.
Onikepe FolarinAfrican Centre of Excellence for Genomics of Infectious Diseases, Redeemer's University, Ede 232102, Osun State, Nigeria.
Anise HappiAfrican Centre of Excellence for Genomics of Infectious Diseases, Redeemer's University, Ede 232102, Osun State, Nigeria.
Isaac KomolafeDepartment of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede 232102, Osun State, Nigeria.
Christian HappiAfrican Centre of Excellence for Genomics of Infectious Diseases, Redeemer's University, Ede 232102, Osun State, Nigeria.ORCID 0000-0002-3056-6705
Redeemer's University · NGUniversity of Abuja · NGUniversity of Ibadan · NGAustralian Institute of Tropical Health and Medicine · AUFederal Medical Centre · NGNational Veterinary Research Institute · NGObafemi Awolowo University · NGUniversity of Jos · NG

Funding

Utilize Microbial Metagenomics for Viral Pathogen CharacterizationU54HG007480 · NHGRI · REDEEMER'S UNIVERSITY · PI HAPPI, CHRISTIAN T. · 2017 to 2022
$5.5M
Host and Microbial Genetic Determinants of Febrile Illness in West AfricaU01HG007480 · NHGRI · REDEEMER'S UNIVERSITY · PI HAPPI, CHRISTIAN T. · 2013 to 2016
$1.6M
Gates Foundation INV-018978International Society for Infectious Diseases 2020 ISID Early career grantNHGRI NIH HHS U01 HG007480NHGRI NIH HHS U54 HG007480NIH-H3Africa U01HG007480 and U54HG007480Rockefeller Foundation Grant #2021 HTHThe Africa CDC through the African Society of Laboratory Medicine [ASLM] Grant #INV018978Wellcome TrustWellcome Trust Project 216619/Z/19/ZWorld Bank project ACE-019 and ACE-IMPACT
6 · The paper itself

Abstract

The rise of bat-associated zoonotic viruses necessitates a close monitoring of their natural hosts. Since the detection of severe acute respiratory syndrome coronavirus (SARS-CoV), it is evident that bats are vital reservoirs of coronaviruses (CoVs). In this study, we investigated the presence of CoVs in multiple bat species in Nigeria to identify viruses in bats at high-risk human contact interfaces. Four hundred and nine bats comprising four bat species close to human habitats were individually sampled from five states in Nigeria between 2019 and 2021. Coronavirus detection was done using broadly reactive consensus PCR primers targeting the RNA-dependent RNA polymerase (RdRp) gene of CoVs. Coronavirus RNA was detected in 39 samples (9.5%, CI 95%: [7.0, 12.8]), of which 29 were successfully sequenced. The identified CoVs in Nigerian bats were from the unclassified African alphacoronavirus lineage and betacoronavirus lineage D (

Indexed as

batscoronavirus diversityNigeriasurveillancezoonosis

Identifiers

PMID36145450
PMCPMC9502725
OpenAlexW4295213446

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.