Evidence map›Paper›PMID 36144690›Full record

ArticleMolecules (Basel, Switzerland)2022

Transcriptomics, Cheminformatics, and Systems Pharmacology Strategies Unveil the Potential Bioactives to Combat COVID-19.

Sivakumar Adarshan, Sakthivel Akassh, Krishnakumar Avinash, Mathivanan Bharathkumar, Pandiyan Muthuramalingam, Hyunsuk Shin, Venkidasamy Baskar, Jen-Tsung Chen, Veluswamy Bhuvaneshwari, Manikandan Ramesh

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Deciphering the Anticancer Arsenal ofInternational journal of medical sciences · 2024
    Article
  4. Article
  5. Article
  6. Network pharmacology: a systems perspective possible underpinning approach for oral cancer treatment.Daru : journal of Faculty of Pharmacy, Tehran University of Medical Sciences · 2023
    Article
  7. Potential Anti-SARS-CoV-2 Molecular Strategies.Molecules (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Sivakumar AdarshanDepartment of Biotechnology, Science Campus, Alagappa University, Karaikudi 630003, India.ORCID 0000-0002-7064-7534
Sakthivel AkasshDepartment of Biotechnology, Sri Shakthi Institute of Engineering and Technology, Coimbatore 641062, India.
Krishnakumar AvinashDepartment of Biotechnology, Sri Shakthi Institute of Engineering and Technology, Coimbatore 641062, India.
Mathivanan BharathkumarDepartment of Biotechnology, Sri Shakthi Institute of Engineering and Technology, Coimbatore 641062, India.
Pandiyan MuthuramalingamDepartment of Biotechnology, Sri Shakthi Institute of Engineering and Technology, Coimbatore 641062, India.ORCID 0000-0001-7294-1625
Hyunsuk ShinDivision of Horticultural Science, College of Agriculture and Life Sciences, Gyeongsang National University, Jinju 52725, Korea.ORCID 0000-0002-2167-4843
Venkidasamy BaskarDepartment of Oral and Maxillofacial Surgery, Saveetha Dental College and Hospitals, Saveetha Institute of Medical and Technical Sciences, Chennai 602105, India.
Jen-Tsung ChenDepartment of Life Sciences, National University of Kaohsiung, Kaohsiung 811, Taiwan.ORCID 0000-0002-3540-4449
Veluswamy BhuvaneshwariDepartment of Biotechnology, PSGR Krishnammal College for Women, Coimbatore 641004, India.ORCID 0000-0002-3761-2188
Manikandan RameshDepartment of Biotechnology, Science Campus, Alagappa University, Karaikudi 630003, India.ORCID 0000-0002-7969-4935
Alagappa University · INGyeongsang National University · KRNational University of Kaohsiung · TWSaveetha University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coronavirus disease (COVID-19) is a viral disease caused by the SARS-CoV-2 virus and is becoming a global threat again because of the higher transmission rate and lack of proper therapeutics as well as the rapid mutations in the genetic pattern of SARS-CoV-2. Despite vaccinations, the prevalence and recurrence of this infection are still on the rise, which urges the identification of potential global therapeutics for a complete cure. Plant-based alternative medicine is becoming popular worldwide because of its higher efficiency and minimal side effects. Yet, identifying the potential medicinal plants and formulating a plant-based medicine is still a bottleneck. Hence, in this study, the systems pharmacology, transcriptomics, and cheminformatics approaches were employed to uncover the multi-targeted mechanisms and to screen the potential phytocompounds from significant medicinal plants to treat COVID-19. These approaches have identified 30 unique COVID-19 human immune genes targeted by the 25 phytocompounds present in four selected ethnobotanical plants. Differential and co-expression profiling and pathway enrichment analyses delineate the molecular signaling and immune functional regulations of the COVID-19 unique genes. In addition, the credibility of these compounds was analyzed by the pharmacological features. The current holistic finding is the first to explore whether the identified potential bioactives could reform into a drug candidate to treat COVID-19. Furthermore, the molecular docking analysis was employed to identify the important bioactive compounds; thus, an ultimately significant medicinal plant was also determined. However, further laboratory evaluation and clinical validation are required to determine the efficiency of a therapeutic formulation against COVID-19.

Indexed as

COVID-19 Drug TreatmentSARS-CoV-2CheminformaticsHumansMolecular Docking SimulationNetwork PharmacologyTranscriptomecheminformaticsCOVID-19molecular dockingphytocompoundssystems pharmacology

Identifiers

PMID36144690
PMCPMC9503185
OpenAlexW4295974752

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.