Evidence map›Paper›PMID 36144499›Full record

ArticleMolecules (Basel, Switzerland)2022

Trident Nano-Indexing the Proteomics Table: Next-Version Clustering of Iron Carbide NPs and Protein Corona.

Murtaza Hasan, Ayesha Zafar, Maryum Jabbar, Tuba Tariq, Yasmeen Manzoor, Muhammad Mahmood Ahmed, Shahbaz Gul Hassan, Xugang Shu, Nasir Mahmood

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Murtaza HasanSchool of Chemistry and Chemical Engineering, Zhongkai University of Agriculture and Engineering, Guangzhou 510225, China.ORCID 0000-0001-7715-9173
Ayesha ZafarDepartment of Biotechnology, The Islamia University of Bahawalpur, Bahawalpur 63100, Pakistan.
Maryum JabbarDepartment of Biotechnology, The Islamia University of Bahawalpur, Bahawalpur 63100, Pakistan.
Tuba TariqDepartment of Biotechnology, The Islamia University of Bahawalpur, Bahawalpur 63100, Pakistan.
Yasmeen ManzoorDepartment of Biotechnology, The Islamia University of Bahawalpur, Bahawalpur 63100, Pakistan.
Muhammad Mahmood AhmedDepartment of Biotechnology, The Islamia University of Bahawalpur, Bahawalpur 63100, Pakistan.ORCID 0000-0002-3217-9688
Shahbaz Gul HassanCollege of Information Science and Engineering, Zhongkai University of Agriculture and Engineering, Guangzhou 510225, China.ORCID 0000-0001-7915-6910
Xugang ShuSchool of Chemistry and Chemical Engineering, Zhongkai University of Agriculture and Engineering, Guangzhou 510225, China.
Nasir MahmoodSchool of Science, RMIT University, Victoria 3000, Australia.ORCID 0000-0002-8340-1058
Islamia University of Bahawalpur · PKZhongkai University of Agriculture and Engineering · CNRMIT University · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein corona composition and precise physiological understanding of differentially expressed proteins are key for identifying disease biomarkers. In this report, we presented a distinctive quantitative proteomics table of molecular cell signaling differentially expressed proteins of corona that formed on iron carbide nanoparticles (NPs). High-performance liquid chromatography/electrospray ionization coupled with ion trap mass analyzer (HPLC/ESI-Orbitrap) and MASCOT helped quantify 142 differentially expressed proteins. Among these proteins, 104 proteins showed upregulated behavior and 38 proteins were downregulated with respect to the control, whereas 48, 32 and 24 proteins were upregulated and 8, 9 and 21 were downregulated CW (control with unmodified NPs), CY (control with modified NPs) and WY (modified and unmodified NPs), respectively. These proteins were further categorized on behalf of their regularity, locality, molecular functionality and molecular masses using gene ontology (GO). A STRING analysis was used to target the specific range of proteins involved in metabolic pathways and molecular processing in different kinds of binding functionalities, such as RNA, DNA, ATP, ADP, GTP, GDP and calcium ion bindings. Thus, this study will help develop efficient protocols for the identification of latent biomarkers in early disease detection using protein fingerprints.

Indexed as

NanoparticlesProtein CoronaAdenosine DiphosphateAdenosine TriphosphateCalciumCarbon Compounds, InorganicCluster AnalysisGuanosine TriphosphateIron CompoundsProteinsProteomicsRNAAdenosine DiphosphateAdenosine TriphosphateCalciumCarbon Compounds, InorganicGuanosine Triphosphateiron carbideIron CompoundsProtein CoronaProteinsRNAbiomarkerbiomaterialscancerearly disease detectionnanoparticle coronaproteomics tablesignaling

Identifiers

PMID36144499
PMCPMC9500999
OpenAlexW4296806714

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.