ArticleInternational journal of molecular sciences2022
Transcriptome Analysis of the Responses of Rice Leaves to Chilling and Subsequent Recovery.
Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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10 citing papers in PubMed, 17 citations in OpenAlex.
- Transcriptome analysis revealed lncRNA-mRNA modules responsive to low temperature stress in Qingke.BMC genomics · 2026Article
- Determining suitable growth period for ratoon rice cultivation in the Yangtze river basin.BMC plant biology · 2025Article
- Physiological and broadly targeted metabolomic analyses of barley (Hordeum vulgare L.) in response to low-temperature stress.BMC genomics · 2025Article
- A Starch Phosphorylase, ZmPHOH, Improves Photosynthetic Recovery from Short-Term Cold Exposure in Maize.International journal of molecular sciences · 2025Article
- Subtilisin-like protease 4 regulates cold tolerance through cell wall modification in rice.Scientific reports · 2025Article
- Insights on the enhancement of chilling tolerance in Rice through over-expression and knock-out studies of OsRBCS3.Plant signaling & behavior · 2024Article
- Integrated miRNA and mRNA Transcriptome Analysis Reveals Regulatory Mechanisms in the Response of WinterInternational journal of molecular sciences · 2024Article
- Discovery of gene regulation mechanisms associated with uniconazole-induced cold tolerance in banana using integrated transcriptome and metabolome analysis.BMC plant biology · 2024Article
- ABF1 Positively Regulates Rice Chilling Tolerance via Inducing Trehalose Biosynthesis.International journal of molecular sciences · 2023Article
- Combined genomic and transcriptomic analysis reveals the contribution of tandem duplication genes to low-temperature adaptation in perennial ryegrass.Frontiers in plant science · 2023Article
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Authors and funding
9 authors at 2 institutions in 2 countries.
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Abstract
Improving chilling tolerance at the seedling stage in rice is essential for agricultural research. We combined a physiological analysis with transcriptomics in a variety Dular subjected to chilling followed by recovery at normal temperature to better understand the chilling tolerance mechanisms of rice. Chilling inhibited the synthesis of chlorophyll and non-structural carbohydrate (NSC) and disrupted the ion balance of the plant, resulting in the impaired function of rice leaves. The recovery treatment can effectively reverse the chilling-related injury. Transcriptome results displayed that 21,970 genes were identified at three different temperatures, and 11,732 genes were differentially expressed. According to KEGG analysis, functional categories for differentially expressed genes (DEGs) mainly included ribosome (8.72%), photosynthesis-antenna proteins (7.38%), phenylpropanoid biosynthesis (11.41%), and linoleic acid metabolism (10.07%). The subcellular localization demonstrated that most proteins were located in the chloroplasts (29.30%), cytosol (10.19%), and nucleus (10.19%). We proposed that some genes involved in photosynthesis, ribosome, phenylpropanoid biosynthesis, and linoleic acid metabolism may play key roles in enhancing rice adaptation to chilling stress and their recovery capacity. These findings provide a foundation for future research into rice chilling tolerance mechanisms.
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