Evidence map›Paper›PMID 36140737›Full record

ArticleGenes2022

First Genome of Rock Lizard

Sofia Ochkalova, Vitaly Korchagin, Andrey Vergun, Avel Urin, Danil Zilov, Sergei Ryakhovsky, Anastasiya Girnyk, Irena Martirosyan, Daria V Zhernakova, Marine Arakelyan and 5 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 3 countries.

Sofia OchkalovaLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.
Vitaly KorchaginLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.ORCID 0000-0003-2264-6294
Andrey VergunLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.ORCID 0000-0001-5255-7802
Avel UrinApplied Genomics Laboratory, SCAMT Institute, ITMO University, Saint Petersburg 197101, Russia.
Danil ZilovApplied Genomics Laboratory, SCAMT Institute, ITMO University, Saint Petersburg 197101, Russia.
Sergei RyakhovskyLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.ORCID 0000-0001-5517-0283
Anastasiya GirnykLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.ORCID 0000-0001-9199-1281
Irena MartirosyanLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.
Daria V ZhernakovaLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.
Marine ArakelyanDepartment of Zoology, Yerevan State University, 1 Alex Manoogian, Yerevan 0025, Armenia.
Felix DanielyanDepartment of Zoology, Yerevan State University, 1 Alex Manoogian, Yerevan 0025, Armenia.
Sergei KliverDepartment of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, 8/2 Acad. Lavrentiev Ave., Novosibirsk 630090, Russia.
Vladimir BrukhinDepartment of Plant Embryology & Reproductive Biology, Komarov Botanical Institute RAS, 2 Professor Popov Street, Saint-Petersburg 197376, Russia.ORCID 0000-0003-1836-0437
Aleksey KomissarovLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.
Alexey RyskovLaboratory of Genome Organization, Institute of Gene Biology of the Russian Academy of Sciences, Vavilova Str., 34/5, Moscow 119334, Russia.ORCID 0000-0002-4159-0671
ITMO University · RUInstitute of Gene Biology · RUYerevan State University · AMFlorida Museum of Natural History · USInstitute of Molecular and Cell Biology · RUMoscow State Pedagogical University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The extant reptiles are one of the most diverse clades among terrestrial vertebrates and one of a few groups with instances of parthenogenesis. Due to the hybrid origin of parthenogenetic species, reference genomes of the parental species as well as of the parthenogenetic progeny are indispensable to explore the genetic foundations of parthenogenetic reproduction. Here, we report on the first genome assembly of rock lizard

Indexed as

LizardsAnimalsGenomeMicrosatellite RepeatsParthenogenesisPhylogenyde novo genome assemblygenome sequencingHox genesLacertidaemicroRNAparthenogenesisrock lizard

Identifiers

PMID36140737
PMCPMC9498476
OpenAlexW4294151494

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.