Evidence map›Paper›PMID 36140121›Full record

ArticleBiosensors2022

Magnetic Nanoparticle-Based Electrochemical Sensing Platform Using Ferrocene-Labelled Peptide Nucleic Acid for the Early Diagnosis of Colorectal Cancer.

Simge Balaban Hanoglu, Ezgi Man, Duygu Harmanci, Serife Tozan Ruzgar, Serdar Sanli, Nazim Arda Keles, Atakan Ayden, Bilge Guvenc Tuna, Ozgul Duzgun, Omer Faruk Ozkan and 6 more

Open access · goldAbstract read
In one paragraph

Article in Biosensors, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.3field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 40 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Simge Balaban HanogluDepartment of Biochemistry, Faculty of Science, Ege University, Bornova, Izmir 35100, Turkey.
Ezgi ManDepartment of Biochemistry, Faculty of Science, Ege University, Bornova, Izmir 35100, Turkey.
Duygu HarmanciCentral Research Test and Analysis Laboratory, Application and Research Center, Ege University, Bornova, Izmir 35100, Turkey.
Serife Tozan RuzgarCentral Research Test and Analysis Laboratory, Application and Research Center, Ege University, Bornova, Izmir 35100, Turkey.
Serdar SanliDepartment of Biochemistry, Faculty of Science, Ege University, Bornova, Izmir 35100, Turkey.ORCID 0000-0002-9048-287X
Nazim Arda KelesDepartment of Medical Biology, School of Medicine, Yeditepe University, Istanbul 34755, Turkey.
Atakan AydenDepartment of Medical Biology, School of Medicine, Yeditepe University, Istanbul 34755, Turkey.
Bilge Guvenc TunaDepartment of Biophysics, School of Medicine, Yeditepe University, Istanbul 34755, Turkey.ORCID 0000-0003-1348-1336
Ozgul DuzgunDepartment of Surgical Oncology, University of Health Sciences, Umraniye Training and Research Hospital, Istanbul 34764, Turkey.
Omer Faruk OzkanDepartment of Surgical Oncology, University of Health Sciences, Umraniye Training and Research Hospital, Istanbul 34764, Turkey.
Soner DoganDepartment of Medical Biology, School of Medicine, Yeditepe University, Istanbul 34755, Turkey.ORCID 0000-0002-7762-8109
Faezeh GhorbanizamaniDepartment of Biochemistry, Faculty of Science, Ege University, Bornova, Izmir 35100, Turkey.
Hichem MoulahoumDepartment of Biochemistry, Faculty of Science, Ege University, Bornova, Izmir 35100, Turkey.ORCID 0000-0003-3934-6415
Emine Guler CelikDepartment of Bioengineering, Faculty of Engineering, Ege University, Bornova, Izmir 35100, Turkey.
Serap EvranDepartment of Biochemistry, Faculty of Science, Ege University, Bornova, Izmir 35100, Turkey.ORCID 0000-0001-6676-4888
Suna TimurDepartment of Biochemistry, Faculty of Science, Ege University, Bornova, Izmir 35100, Turkey.
Ege University · TRYeditepe University · TRÜmraniye Eğitim ve Araştırma Hastanesi · TR

Funding

Scientific and Technological Research Council of Turkey 219S405
6 · The paper itself

Abstract

Diagnostic biomarkers based on epigenetic changes such as DNA methylation are promising tools for early cancer diagnosis. However, there are significant difficulties in directly and specifically detecting methylated DNA regions. Here, we report an electrochemical sensing system based on magnetic nanoparticles that enable a quantitative and selective analysis of the methylated septin9 (mSEPT9) gene, which is considered a diagnostic marker in early stage colorectal cancer (CRC). Methylation levels of SEPT9 in CRC samples were successfully followed by the selective recognition ability of a related peptide nucleic acid (PNA) after hybridization with DNA fragments in human patients' serums and plasma (

Indexed as

Colorectal NeoplasmsMagnetite NanoparticlesPeptide Nucleic AcidsAmino Acids, Branched-ChainBiomarkers, TumorDNAEarly Detection of CancerFerrous CompoundsHumansMetallocenesSeptinsTransaminasesTranscription FactorsAmino Acids, Branched-ChainBCAT1 protein, humanBiomarkers, TumorDNAferroceneFerrous CompoundsMagnetite NanoparticlesMetallocenesPeptide Nucleic AcidsSeptinsTransaminasesTranscription Factorsbiosensorblood biomarkerscolorectal cancer (CRC)magnetic nanoparticlespoint-of-care diagnostic (POC)

Identifiers

PMID36140121
PMCPMC9496070
OpenAlexW4295106752

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.