Evidence map›Paper›PMID 36139590›Full record

ArticleCancers2022

Combined Focused Next-Generation Sequencing Assays to Guide Precision Oncology in Solid Tumors: A Retrospective Analysis from an Institutional Molecular Tumor Board.

Thomas S Tarawneh, Fiona R Rodepeter, Julia Teply-Szymanski, Petra Ross, Vera Koch, Clemens Thölken, Jonas A Schäfer, Niklas Gremke, Hildegard I D Mack, Judith Gold and 15 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. [Precision oncology and molecular tumor boards].Innere Medizin (Heidelberg, Germany) · 2024
    Review
  8. [Personalized medicine in oncology].Pathologie (Heidelberg, Germany) · 2024
    Review
  9. Article
  10. [Precision medicine in oncology].Innere Medizin (Heidelberg, Germany) · 2024
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 1 institution in 1 country.

Thomas S TarawnehDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Fiona R RodepeterInstitute of Pathology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Julia Teply-SzymanskiInstitute of Pathology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Petra RossDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Vera KochDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Clemens ThölkenInstitute of Medical Bioinformatics and Biostatistics, Philipps-University Marburg, Hans-Meerwein-Straße 6, 35032 Marburg, Germany.ORCID 0000-0003-4328-9193
Jonas A SchäferDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.ORCID 0000-0001-8852-1457
Niklas GremkeDepartment of Gynecology, Gynecologic Endocrinology and Oncology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Hildegard I D MackDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Judith GoldDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Jorge Riera-KnorrenschildDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Christian WilhelmDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Anja RinkeDepartment of Gastroenterology and Endocrinology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.ORCID 0000-0002-8156-2915
Martin MiddekeComprehensive Cancer Center Marburg, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Andreas KlemmerDepartment of Pulmonary and Critical Care Medicine, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Marcel RomeyInstitute of Pathology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Akira HattesohlInstitute of Pathology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Moritz JesinghausInstitute of Pathology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Christian GörgDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Jens FigielDepartment of Diagnostic and Interventional Radiology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Ho-Ryun ChungInstitute of Medical Bioinformatics and Biostatistics, Philipps-University Marburg, Hans-Meerwein-Straße 6, 35032 Marburg, Germany.ORCID 0000-0002-4132-0911
Thomas WündischComprehensive Cancer Center Marburg, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Andreas NeubauerDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Carsten DenkertInstitute of Pathology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.
Elisabeth K M MackDepartment of Hematology, Oncology and Immunology, Philipps-University Marburg, Baldingerstraße, 35043 Marburg, Germany.ORCID 0000-0003-4061-494X
Philipps University of Marburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIncreasing knowledge of cancer biology and an expanding spectrum of molecularly targeted therapies provide the basis for precision oncology. Despite extensive gene diagnostics, previous reports indicate that less than 10% of patients benefit from this concept.

methodsWe retrospectively analyzed all patients referred to our center's Molecular Tumor Board (MTB) from 2018 to 2021. Molecular testing by next-generation sequencing (NGS) included a 67-gene panel for the detection of short-sequence variants and copy-number alterations, a 53- or 137-gene fusion panel and an ultra-low-coverage whole-genome sequencing for the detection of additional copy-number alterations outside the panel's target regions. Immunohistochemistry for microsatellite instability and PD-L1 expression complemented NGS.

resultsA total of 109 patients were referred to the MTB. In all, 78 patients received therapeutic proposals (70 based on NGS) and 33 were treated accordingly. Evaluable patients treated with MTB-recommended therapy (

conclusionThe combined focused sequencing assays detected targetable alterations in the majority of patients. Patient benefits appeared to lie in the same range as with large-scale sequencing approaches.

Indexed as

gene panelsmolecular tumor boardnext-generation sequencingprecision oncologysolid tumorsultra-low-coverage whole-genome sequencing

Identifiers

PMID36139590
PMCPMC9496918
OpenAlexW4295592647

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.