Evidence map›Paper›PMID 36138039›Full record

ArticleNature communications2022

Tracking changes in SARS-CoV-2 transmission with a novel outpatient sentinel surveillance system in Chicago, USA.

Reese Richardson, Emile Jorgensen, Philip Arevalo, Tobias M Holden, Katelyn M Gostic, Massimo Pacilli, Isaac Ghinai, Shannon Lightner, Sarah Cobey, Jaline Gerardin

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Reese RichardsonDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL, USA.ORCID 0000-0002-6058-5886
Emile JorgensenChicago Department of Public Health, Chicago, IL, USA.
Philip ArevaloDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Tobias M HoldenDepartment of Preventive Medicine and Institute for Global Health, Northwestern University, Chicago, IL, USA.
Katelyn M GosticDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.
Massimo PacilliChicago Department of Public Health, Chicago, IL, USA.
Isaac GhinaiChicago Department of Public Health, Chicago, IL, USA.
Shannon LightnerIllinois Department of Public Health, Springfield, IL, USA.
Sarah CobeyDepartment of Ecology and Evolution, University of Chicago, Chicago, IL, USA.ORCID 0000-0001-5298-8979
Jaline GerardinDepartment of Preventive Medicine and Institute for Global Health, Northwestern University, Chicago, IL, USA. jgerardin@northwestern.edu.ORCID 0000-0001-8071-9928
Chicago Department of Public Health · USNorthwestern University · USUniversity of Chicago · USIllinois Department of Public Health · US

Funding

Developing Capacity to Evaluate Training Programs via Development of Human, Institutional and Social CapitalT32GM008449 · NIGMS · NORTHWESTERN UNIVERSITY · PI LEONARD, JOSHUA NATHANIEL · 1993 to 2023
$7.8M
NIGMS NIH HHS T32 GM008449
6 · The paper itself

Abstract

Public health indicators typically used for COVID-19 surveillance can be biased or lag changing community transmission patterns. In this study, we investigate whether sentinel surveillance of recently symptomatic individuals receiving outpatient diagnostic testing for SARS-CoV-2 could accurately assess the instantaneous reproductive number R(t) and provide early warning of changes in transmission. We use data from community-based diagnostic testing sites in the United States city of Chicago. Patients tested at community-based diagnostic testing sites between September 2020 and June 2021, and reporting symptom onset within four days preceding their test, formed the sentinel population. R(t) calculated from sentinel cases agreed well with R(t) from other indicators. Retrospectively, trends in sentinel cases did not precede trends in COVID-19 hospital admissions by any identifiable lead time. In deployment, sentinel surveillance held an operational recency advantage of nine days over hospital admissions. The promising performance of opportunistic sentinel surveillance suggests that deliberately designed outpatient sentinel surveillance would provide robust early warning of increasing transmission.

Indexed as

COVID-19SARS-CoV-2ChicagoHumansOutpatientsRetrospective StudiesSentinel SurveillanceUnited States

Identifiers

PMID36138039
PMCPMC9499975
OpenAlexW4296808710

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.