Evidence map›Paper›PMID 36134379›Full record

ArticleNanoscale advances2022

Site-specific recognition of SARS-CoV-2 nsp1 protein with a tailored titanium dioxide nanoparticle - elucidation of the complex structure using NMR data and theoretical calculation.

Peter Agback, Tatiana Agback, Francisco Dominguez, Elena I Frolova, Gulaim A Seisenbaeva, Vadim G Kessler

Abstract read
In one paragraph

Article in Nanoscale advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Peter AgbackDepartment of Molecular Sciences, Swedish University of Agricultural Sciences Box 7015 SE-75007 Uppsala Sweden peter.agback@slu.se vadim.kessler@slu.se.
Tatiana AgbackDepartment of Molecular Sciences, Swedish University of Agricultural Sciences Box 7015 SE-75007 Uppsala Sweden peter.agback@slu.se vadim.kessler@slu.se.ORCID https://orcid.org/0000-0003-1325-6024
Francisco DominguezDepartment of Microbiology, University of Alabama at Birmingham 1720 2nd Ave South Birmingham AL 35294 USA.
Elena I FrolovaDepartment of Microbiology, University of Alabama at Birmingham 1720 2nd Ave South Birmingham AL 35294 USA.
Gulaim A SeisenbaevaDepartment of Molecular Sciences, Swedish University of Agricultural Sciences Box 7015 SE-75007 Uppsala Sweden peter.agback@slu.se vadim.kessler@slu.se.ORCID https://orcid.org/0000-0003-0072-6082
Vadim G KesslerDepartment of Molecular Sciences, Swedish University of Agricultural Sciences Box 7015 SE-75007 Uppsala Sweden peter.agback@slu.se vadim.kessler@slu.se.ORCID https://orcid.org/0000-0001-7570-2814

Funding

Mechanistic understanding of SH3 domain-containing protein function in alphavirus replicationR21AI146969 · NIAID · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI FROLOV, ILYA V. · 2019 to 2020
$401k
NIAID NIH HHS R21 AI146969
6 · The paper itself

Abstract

The ongoing world-wide Severe Acute Respiratory Syndrome coronavirus 2 (SARS-CoV-2) pandemic shows the need for new potential sensing and therapeutic means against the CoV viruses. The SARS-CoV-2 nsp1 protein is important, both for replication and pathogenesis, making it an attractive target for intervention. In this study we investigated the interaction of this protein with two types of titania nanoparticles by NMR and discovered that while lactate capped particles essentially did not interact with the protein chain, the aminoalcohol-capped ones showed strong complexation with a distinct part of an ordered α-helix fragment. The structure of the forming complex was elucidated based on NMR data and theoretical calculation. To the best of our knowledge, this is the first time that a tailored titanium oxide nanoparticle was shown to interact specifically with a unique site of the full-length SARS-CoV-2 nsp1 protein, possibly interfering with its functionality.

Identifiers

PMID36134379
PMCPMC9419012

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.