Evidence map›Paper›PMID 36133560›Full record

ArticleNanoscale advances2019

Behavior of α, β tubulin in DMSO-containing electrolytes.

Aarat P Kalra, Piyush Kar, Jordane Preto, Vahid Rezania, Aristide Dogariu, John D Lewis, Jack A Tuszynski, Karthik Shankar

Open access · goldAbstract read
In one paragraph

Article in Nanoscale advances, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Aarat P KalraDepartment of Physics, University of Alberta 11335 Saskatchewan Dr NW Edmonton Alberta T6G 2M9 Canada aarat@ualberta.ca.
Piyush KarDepartment of Electrical and Computer Engineering, University of Alberta 9107-116 St Edmonton Alberta T6G 2V4 Canada.
Jordane PretoDepartment of Physics, University of Alberta 11335 Saskatchewan Dr NW Edmonton Alberta T6G 2M9 Canada aarat@ualberta.ca.
Vahid RezaniaDepartment of Physical Sciences, MacEwan University Edmonton Alberta T5J 4S2 Canada.
Aristide DogariuCREOL, The College of Optics and Photonics, University of Central Florida Orlando FL 32816 USA.
John D LewisDepartment of Oncology, University of Alberta Edmonton Alberta T6G 1Z2 Canada.ORCID https://orcid.org/0000-0002-7734-1204
Jack A TuszynskiDepartment of Physics, University of Alberta 11335 Saskatchewan Dr NW Edmonton Alberta T6G 2M9 Canada aarat@ualberta.ca.
Karthik ShankarDepartment of Electrical and Computer Engineering, University of Alberta 9107-116 St Edmonton Alberta T6G 2V4 Canada.ORCID https://orcid.org/0000-0001-7347-3333
University of Alberta · CAAlberta Hospital Edmonton · CAUniversity of Central Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

α, β-tubulin is a cytoskeletal protein that forms cylindrical structures termed microtubules, which are crucial to the cell for a variety of roles. Microtubules are frequently modelled as one-dimensional bionanowires that act as ion transporters in the cell. In this work, we used dynamic light scattering (DLS) to measure the hydrodynamic diameter of tubulin in the presence of a polar aprotic co-solvent. We found that the hydrodynamic diameter increased with increasing DMSO volume fraction, almost doubling at 20% DMSO. To evaluate if this was due to an enlarged solvation shell, we performed reference interaction site model (RISM) simulations and found that the extent of solvation was unchanged. Using fluorescence microscopy, we then showed that tubulin was polymerization competent in the presence of colchicine, and thus inferred the presence of oligomers in the presence of DMSO, which points to its mechanism of action as a microtubule polymerization enhancing agent. Tubulin oligomers are known to form when microtubules depolymerize and are controversially implicated in microtubule polymerization. We show that DLS may be used to monitor early-state microtubule polymerization and is a viable alternative to fluorescence and electron microscopy-based methods. Our findings showing that DMSO causes tubulin oligomerization are thus of critical importance, both for creating bio-inspired nanotechnology and determining its biophysical roles in the cell.

Identifiers

PMID36133560
PMCPMC9418024
OpenAlexW2952322656

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.