Evidence map›Paper›PMID 36133217›Full record

ArticleJournal of oral biology and craniofacial research

Reference gene validation for the relative quantification of cannabinoid receptor expression in human odontoblasts via quantitative polymerase chain reaction.

Laura M Navarro-Saiz, Lilia J Bernal-Cepeda, Felipe García-Jiménez, Deisy Abril, Jaime E Castellanos

Open access · hybridAbstract read
In one paragraph

Article in Journal of oral biology and craniofacial research. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 57% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Laura M Navarro-SaizGrupo de Investigación Básica y Aplicada en Odontología, Universidad Nacional de Colombia, Bogotá, 111321, Colombia.
Lilia J Bernal-CepedaGrupo de Investigación Básica y Aplicada en Odontología, Universidad Nacional de Colombia, Bogotá, 111321, Colombia.
Felipe García-JiménezGrupo de Investigación Básica y Aplicada en Odontología, Universidad Nacional de Colombia, Bogotá, 111321, Colombia.
Deisy AbrilBacterial Molecular Genetics Laboratory, Universidad El Bosque, Bogotá, 110121, Colombia.
Jaime E CastellanosGrupo de Investigación Básica y Aplicada en Odontología, Universidad Nacional de Colombia, Bogotá, 111321, Colombia.
Universidad Nacional de Colombia · COUniversidad El Bosque · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: The aim of this study was to identify and validate the reference genes in cultured human odontoblasts to quantify their cannabinoid receptor transcripts. Methods: The most stably transcribed genes in cultured human odontoblast cells were identified using the RefGenes tool and were selected for real-time polymerase chain reaction (PCR) amplification. Human odontoblast cells were differentiated from mesenchymal stem cells using a transforming growth factor-β-supplemented differentiation medium, and total RNA was purified. Reverse transcription-quantitative PCR and relative quantification analyses were performed using the Schefe's method. The relative expression dataset was analyzed to select the most stable genes. Results: The analysis showed that the transcripts of cholinergic receptor nicotinic beta 2 subunit, LIM homeobox transcription factor 1 beta, and family with sequence similarity 223 member B presented the lowest standard deviation (SD) in expression (SD: 0.2, 0.17, and 0.16, respectively). These genes showed similar expression levels as the target genes (cannabinoid receptors). Significant differences were found in the relative expression levels of cannabinoid receptors using the selected genes compared to those calculated using beta actin transcripts as references (p < 0.05). Conclusions: The strategy reported here for searching and verifying new reference genes will aid in the accurate and reliable expression of cannabinoid receptors in human odontoblast cells.

Indexed as

Cannabinoid receptor 1Cannabinoid receptor 2CB, cannabinoidGAPDH, glyceraldehyde‐3‐phosphate dehydrogenaseOdontoblastOLCs, odontoblast-like cellsReference geneRT-qPCRRT-qPCR, reverse transcription-quantitative polymerase chain reaction

Identifiers

PMID36133217
PMCPMC9483783
OpenAlexW4295940612

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.