Evidence map›Paper›PMID 36133177›Full record

ArticleAccess microbiology2022

Microbiome composition and autochthonous probiotics from contrasting probiosis/dysbiosis states in cobia (

Marcela Villegas-Plazas, Luisa Villamil, María Angélica Martínez-Silva, Tatiana González-Jiménez, Marcela Salazar, Linda Güiza, Mabel Mendoza, Howard Junca

Open access · goldAbstract read
In one paragraph

Article in Access microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 7 institutions in 3 countries.

Marcela Villegas-PlazasRG Microbial Ecology: Metabolism, Genomics & Evolutions, Div. Ecogenomics & Holobionts, Microbiomas Foundation, Chia, Colombia.ORCID https://orcid.org/0000-0002-2163-9052
Luisa VillamilUniversidad Jorge Tadeo Lozano, Sede Santa Marta, Colombia.
María Angélica Martínez-SilvaUniversidad Jorge Tadeo Lozano, Sede Santa Marta, Colombia.
Tatiana González-JiménezUniversidad Jorge Tadeo Lozano, Sede Santa Marta, Colombia.
Marcela SalazarCorporación CorpoGen, Bogotá, Colombia.
Linda GüizaBenchmark Genetics Colombia, Punta Canoas, Cartagena, Colombia.
Mabel MendozaCentro de Investigación de la Acuicultura en Colombia, Ceniacua, Cartagena, Colombia.
Howard JuncaRG Microbial Ecology: Metabolism, Genomics & Evolutions, Div. Ecogenomics & Holobionts, Microbiomas Foundation, Chia, Colombia.
Microbiomas Foundation · COBenchmark Holdings (Norway) · NOCentro de Investigación de la Caña de Azúcar de Colombia · COCorpoGen (Colombia) · COUniversidad de Bogotá Jorge Tadeo Lozano · COUniversidad de La Sabana · COUniversité du Québec à Rimouski · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbiome components and bacterial isolates related to healthy and epitheliocystis states in aquaculture cycles of cobia fish were studied. We detected well-defined 16S rRNA amplicon gene sequence variants showing differential abundance in healthy or diseased cycles. Isolation trials were performed, and experimental tests were used to determine probiotic potential of the bacterial strains obtained from water, tissues or live food used in this aquaculture model. The taxonomic affiliation of these strains was cross-compared against microbiome components, finding that some of them had close or identical affiliation to the abundant types found in healthy cycles. Strains belonging to the groups already identified as predominant by culture-independent means were screened as potential probiotics based on desirable activities such as antagonism and antibiosis against marine pathogenic bacteria, quorum quenching, bile acid resistance, antibiotic sensitivity and enzymatic activities for improved nutrient digestion. We have also found that in the tracking of microbiome composition across different developmental stages of cobia, healthy cycles exhibited a consistent high relative abundance of a

Indexed as

cobiadysbiosisepitheliocystisfishMesobacillusmicrobiomeprobiosis

Identifiers

PMID36133177
PMCPMC9484664
OpenAlexW4292661900

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.