Evidence map›Paper›PMID 36129965›Full record

ArticlePLoS genetics2022

The germ cell-specific RNA binding protein RBM46 is essential for spermatogonial differentiation in mice.

Natoya J Peart, Taylor A Johnson, Sungkyoung Lee, Matthew J Sears, Fang Yang, Mathieu Quesnel-Vallières, Huijuan Feng, Yocelyn Recinos, Yoseph Barash, Chaolin Zhang and 4 more

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  10. Regulation of early gonocyte differentiation in zebrafish.Biochemical Society transactions · 2025
    Article
  11. Review
  12. Article
  13. YTHDC2 serves a distinct late role in spermatocytes during germ cell differentiation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Natoya J PeartDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.ORCID 0000-0001-7264-062X
Taylor A JohnsonDepartment of Anatomy and Cell Biology, Brody School of Medicine, East Carolina University, Greenville, North Carolina, United States of America.ORCID 0000-0001-5014-5943
Sungkyoung LeeDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.ORCID 0000-0003-1943-9120
Matthew J SearsDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Fang YangDepartment of Biomedical Sciences, University of Pennsylvania School of Veterinary Medicine, Philadelphia, Pennsylvania, United States of America.
Mathieu Quesnel-VallièresDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.ORCID 0000-0001-9945-8123
Huijuan FengDepartment of Systems Biology and Department of Biochemistry and Molecular Biophysics, Columbia University, New York, New York, United States of America.
Yocelyn RecinosDepartment of Systems Biology and Department of Biochemistry and Molecular Biophysics, Columbia University, New York, New York, United States of America.ORCID 0000-0002-7377-8660
Yoseph BarashDepartment of Genetics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.ORCID 0000-0003-3005-5048
Chaolin ZhangDepartment of Systems Biology and Department of Biochemistry and Molecular Biophysics, Columbia University, New York, New York, United States of America.
Brian P HermannDepartment of Biology, University of Texas at San Antonio, San Antonio, Texas, United States of America.ORCID 0000-0002-0503-3616
P Jeremy WangDepartment of Biomedical Sciences, University of Pennsylvania School of Veterinary Medicine, Philadelphia, Pennsylvania, United States of America.ORCID 0000-0003-2311-4089
Christopher B GeyerDepartment of Anatomy and Cell Biology, Brody School of Medicine, East Carolina University, Greenville, North Carolina, United States of America.ORCID 0000-0003-2974-3871
Russ P CarstensDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
University of Pennsylvania · USColumbia University · USEast Carolina University · USThe University of Texas at San Antonio · US

Funding

Complexity and evolution of splicing-regulatory networksR35GM145279 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Chaolin Zhang · 2022 to 2026
$4.6M
RNA Regulatory Networks in Neuronal Cell Type Diversity and FunctionR01NS125018 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Chaolin Zhang · 2022 to 2026
$3.0M
Single-nucleotide resolution mapping of allelic protein-RNA interactions and splicing-regulatory variantsR01GM124486 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHANG, CHAOLIN · 2018 to 2021
$1.8M
The role of retinoid exposure in specification of the foundational SSC poolR01HD090083 · NICHD · EAST CAROLINA UNIVERSITY · PI GEYER, CHRISTOPHER BENNETT · 2017 to 2021
$1.4M
Integrative analysis of tissue-specific alternative splicing regulation under adaptive selectionR01GM136856 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHANG, CHAOLIN · 2021 to 2022
$1.0M
Comprehensive determination of the human proteins that define the splicing codeR21HG006892 · NHGRI · UNIVERSITY OF PENNSYLVANIA · PI CARSTENS, RUSS PAUL · 2012 to 2013
$440k
Challenging the role of retinoic acid in meiotic initiationR21HD105963 · NICHD · EAST CAROLINA UNIVERSITY · PI GEYER, CHRISTOPHER BENNETT · 2022 to 2023
$424k
NHGRI NIH HHS R21 HG006892NICHD NIH HHS R01 HD090083NICHD NIH HHS R21 HD105963NIGMS NIH HHS R01 GM124486NIGMS NIH HHS R01 GM136856NIGMS NIH HHS R35 GM145279NINDS NIH HHS R01 NS125018
6 · The paper itself

Abstract

Control over gene expression is exerted, in multiple stages of spermatogenesis, at the post-transcriptional level by RNA binding proteins (RBPs). We identify here an essential role in mammalian spermatogenesis and male fertility for 'RNA binding protein 46' (RBM46). A highly evolutionarily conserved gene, Rbm46 is also essential for fertility in both flies and fish. We found Rbm46 expression was restricted to the mouse germline, detectable in males in the cytoplasm of premeiotic spermatogonia and meiotic spermatocytes. To define its requirement for spermatogenesis, we generated Rbm46 knockout (KO, Rbm46-/-) mice; although male Rbm46-/- mice were viable and appeared grossly normal, they were infertile. Testes from adult Rbm46-/- mice were small, with seminiferous tubules containing only Sertoli cells and few undifferentiated spermatogonia. Using genome-wide unbiased high throughput assays RNA-seq and 'enhanced crosslinking immunoprecipitation' coupled with RNA-seq (eCLIP-seq), we discovered RBM46 could bind, via a U-rich conserved consensus sequence, to a cohort of mRNAs encoding proteins required for completion of differentiation and subsequent meiotic initiation. In summary, our studies support an essential role for RBM46 in regulating target mRNAs during spermatogonia differentiation prior to the commitment to meiosis in mice.

Indexed as

SpermatogenesisSpermatogoniaAnimalsCell DifferentiationMaleMammalsMeiosisMiceMice, KnockoutRNA-Binding ProteinsRNA, MessengerSpermatocytesTestisRbm46 protein, mouseRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID36129965
PMCPMC9529142
OpenAlexW4297875025

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.