Evidence map›Paper›PMID 36129957›Full record

ArticlePloS one2022

Genome analysis of secondary metabolite‑biosynthetic gene clusters of Photorhabdus akhurstii subsp. akhurstii and its antibacterial activity against antibiotic-resistant bacteria.

Paramaporn Muangpat, Wipanee Meesil, Jatuporn Ngoenkam, Yothin Teethaisong, Rapee Thummeepak, Sutthirat Sitthisak, Sarunporn Tandhavanant, Narisara Chantratita, Helge B Bode, Apichat Vitta and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Antibacterial Potential ofFoods (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Paramaporn MuangpatFaculty of Medical Science, Department of Microbiology and Parasitology, Naresuan University, Phitsanulok, Thailand.
Wipanee MeesilFaculty of Medical Science, Department of Microbiology and Parasitology, Naresuan University, Phitsanulok, Thailand.
Jatuporn NgoenkamFaculty of Medical Science, Department of Microbiology and Parasitology, Naresuan University, Phitsanulok, Thailand.
Yothin TeethaisongFaculty of Allied Health Sciences, Department of Biomedical Sciences, Burapha University, Chonburi, Thailand.ORCID 0000-0002-0387-8666
Rapee ThummeepakFaculty of Medical Science, Department of Microbiology and Parasitology, Naresuan University, Phitsanulok, Thailand.
Sutthirat SitthisakFaculty of Medical Science, Department of Microbiology and Parasitology, Naresuan University, Phitsanulok, Thailand.
Sarunporn TandhavanantFaculty of Tropical Medicine, Department of Microbiology and Immunology, Mahidol University, Bangkok, Thailand.ORCID 0000-0003-0261-3233
Narisara ChantratitaFaculty of Tropical Medicine, Department of Microbiology and Immunology, Mahidol University, Bangkok, Thailand.
Helge B BodeMolekulare Biotechnologie, Goethe Universität Frankfurt, Frankfurt am Main, Germany.
Apichat VittaFaculty of Medical Science, Department of Microbiology and Parasitology, Naresuan University, Phitsanulok, Thailand.
Aunchalee ThanwisaiFaculty of Medical Science, Department of Microbiology and Parasitology, Naresuan University, Phitsanulok, Thailand.ORCID 0000-0001-7842-2850
Naresuan University · THMahidol University · THBurapha University · THGoethe University Frankfurt · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Xenorhabdus and Photorhabdus can produce a variety of secondary metabolites with broad spectrum bioactivity against microorganisms. We investigated the antibacterial activity of Xenorhabdus and Photorhabdus against 15 antibiotic-resistant bacteria strains. Photorhabdus extracts had strong inhibitory the growth of Methicillin-resistant Staphylococcus aureus (MRSA) by disk diffusion. The P. akhurstii s subsp. akhurstii (bNN168.5_TH) extract showed lower minimum inhibitory concentrations (MIC) and minimal bactericidal concentrations (MBC). The interaction between either P. akhurstii subsp. akhurstii (bNN141.3_TH) or P. akhurstii subsp. akhurstii (bNN168.5_TH) or P. hainanensis (bNN163.3_TH) extract in combination with oxacillin determined by checkerboard assay exhibited partially synergistic interaction with fractional inhibitory concentration index (FICI) of 0.53. Time-killing assay for P. akhurstii subsp. akhurstii (bNN168.5_TH) extract against S. aureus strain PB36 significantly decreased cell viability from 105 CFU/ml to 103 CFU/ml within 30 min (P < 0.001, t-test). Transmission electron microscopic investigation elucidated that the bNN168.5_TH extract caused treated S. aureus strain PB36 (MRSA) cell membrane damage. The biosynthetic gene clusters of the bNN168.5_TH contained non-ribosomal peptide synthetase cluster (NRPS), hybrid NRPS-type l polyketide synthase (PKS) and siderophore, which identified potentially interesting bioactive products: xenematide, luminmide, xenortide A-D, luminmycin A, putrebactin/avaroferrin and rhizomide A-C. This study demonstrates that bNN168.5_TH showed antibacterial activity by disrupting bacterial cytoplasmic membrane and the draft genome provided insights into the classes of bioactive products. This also provides a potential approach in developing a novel antibacterial agent.

Indexed as

Methicillin-Resistant Staphylococcus aureusPhotorhabdusXenorhabdusAnti-Bacterial AgentsMicrobial Sensitivity TestsMultigene FamilyOxacillinPlant ExtractsPolyketide SynthasesSiderophoresStaphylococcus aureusAnti-Bacterial AgentsOxacillinPlant ExtractsPolyketide SynthasesSiderophores

Identifiers

PMID36129957
PMCPMC9491552
OpenAlexW4296809105

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.