Evidence map›Paper›PMID 36129852›Full record

ArticlePloS one2022

Inferring stimulation induced short-term synaptic plasticity dynamics using novel dual optimization algorithm.

Alireza Ghadimi, Leon Amadeus Steiner, Milos R Popovic, Luka Milosevic, Milad Lankarany

Abstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Alireza GhadimiKrembil Research Institute - University Health Network (UHN), Toronto, Ontario, Canada.ORCID 0000-0002-2698-1252
Leon Amadeus SteinerKrembil Research Institute - University Health Network (UHN), Toronto, Ontario, Canada.
Milos R PopovicInstitute of Biomaterials & Biomedical Engineering (IBBME), University of Toronto, Toronto, Ontario, Canada.
Luka MilosevicKrembil Research Institute - University Health Network (UHN), Toronto, Ontario, Canada.
Milad LankaranyKrembil Research Institute - University Health Network (UHN), Toronto, Ontario, Canada.ORCID 0000-0001-6571-2867

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Experimental evidence in both human and animal studies demonstrated that deep brain stimulation (DBS) can induce short-term synaptic plasticity (STP) in the stimulated nucleus. Given that DBS-induced STP may be connected to the therapeutic effects of DBS, we sought to develop a computational predictive model that infers the dynamics of STP in response to DBS at different frequencies. Existing methods for estimating STP-either model-based or model-free approaches-require access to pre-synaptic spiking activity. However, in the context of DBS, extracellular stimulation (e.g. DBS) can be used to elicit presynaptic activations directly. We present a model-based approach that integrates multiple individual frequencies of DBS-like electrical stimulation as pre-synaptic spikes and infers parameters of the Tsodyks-Markram (TM) model from post-synaptic currents of the stimulated nucleus. By distinguishing between the steady-state and transient responses of the TM model, we develop a novel dual optimization algorithm that infers the model parameters in two steps. First, the TM model parameters are calculated by integrating multiple frequencies of stimulation to estimate the steady state response of post-synaptic current through a closed-form analytical solution. The results of this step are utilized as the initial values for the second step in which a non-derivative optimization algorithm is used to track the transient response of the post-synaptic potential across different individual frequencies of stimulation. Moreover, in order to confirm the applicability of the method, we applied our algorithm-as a proof of concept-to empirical data recorded from acute rodent brain slices of the subthalamic nucleus (STN) during DBS-like stimulation to infer dynamics of STP for inhibitory synaptic inputs.

Indexed as

Deep Brain StimulationSubthalamic NucleusAlgorithmsAnimalsElectric StimulationHumansNeuronal PlasticitySynaptic Potentials

Identifiers

PMID36129852
PMCPMC9491593

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.