Evidence map›Paper›PMID 36129672›Full record

ArticleHuman cell2022

Pyroptosis: a novel signature to predict prognosis and immunotherapy response in gliomas.

Guiying He, Zhimin Chen, Shenghua Zhuo, Jingzhi Tang, Weijie Hao, Kun Yang, Chunshui Yang

Abstract read
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In one paragraph

Article in Human cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 1 country.

Guiying He *Department of Neurology, Shenzhen Nanshan People's Hospital and the 6th Affiliated Hospital of Shenzhen University Health Science Center, Shenzhen, 518052, Guangdong, China.
Zhimin Chen *State Key Laboratory of Oncogenes and Related Genes, School of Medicine, Renji-Med X Clinical Stem Cell Research Center, Ren Ji Hospital, Shanghai Jiao Tong University, Shanghai, 200127, China.
Shenghua Zhuo *Department of Neurosurgery, The First Affiliated Hospital of Hainan Medical University, Haikou, 570102, Hainan, China.
Jingzhi TangDepartment of Ultrasound, Fudan University Shanghai Cancer Center, Shanghai, 200433, China.
Weijie HaoState Key Laboratory of Oncogenes and Related Genes, School of Medicine, Renji-Med X Clinical Stem Cell Research Center, Ren Ji Hospital, Shanghai Jiao Tong University, Shanghai, 200127, China.
Kun YangDepartment of Neurosurgery, The First Affiliated Hospital of Hainan Medical University, Haikou, 570102, Hainan, China. chbyk1379@163.com.
Chunshui YangDepartment of Neurology, Shenzhen Nanshan People's Hospital and the 6th Affiliated Hospital of Shenzhen University Health Science Center, Shenzhen, 518052, Guangdong, China. Yangzyi@126.com.ORCID http://orcid.org/0000-0002-2892-530X
Hainan Medical University · CNShanghai Jiao Tong University · CNFudan University Shanghai Cancer Center · CNShenzhen Sixth People's Hospital · CNShenzhen University Health Science Center · CN

Funding

Finance science and technology project of hainan province ZDYF2019129Finance science and technology project of hainan province ZDYF2022SHFZ088the Innovative Research Project of Hainan Graduate Students Qhyb2021-58the National Nature Science Foundation of China 82060456
6 · The paper itself

Abstract

Gliomas are the most common primary brain tumors and are highly malignant with a poor prognosis. Pyroptosis, an inflammatory form of programmed cell death, promotes the inflammatory cell death of cancer. Studies have demonstrated that pyroptosis can promote the inflammatory cell death (ICD) of cancer, thus affecting the prognosis of cancer patients. Therefore, genes that control pyroptosis could be a promising candidate bio-indicator in tumor therapy. The function of pyroptosis-related genes (PRGs) in gliomas was investigated based on the Chinese Glioma Genome Atlas (CGGA), the Cancer Genome Atlas (TCGA) and the Repository of Molecular Brain Neoplasia Data (Rembrandt) databases. In this study, using the non-negative matrix factorization (NMF) clustering method, 26 PRGs from the RNA sequencing data were divided into two subgroups. The LASSO and Cox regression was used to develop a 4-gene (BAX, Caspase-4, Caspase-8, PLCG1) risk signature, and all glioma patients in the CGGA, TCGA and Rembrandt cohorts were divided into low- and high-risk groups. The results demonstrate that the gene risk signature related to clinical features can be used as an independent prognostic indicator in glioma patients. Moreover, the high-risk subtype had rich immune infiltration and high expression of immune checkpoint genes in the tumor immune microenvironment (TIME). The analysis of the Submap algorithm shows that patients in the high-risk group could benefit more from anti-PD1 treatment. The risk characteristics associated with pyroptosis proposed in this study play an essential role in TIME and can potentially predict the prognosis and immunotherapeutic response of glioma patients.

Indexed as

Brain NeoplasmsGliomabcl-2-Associated X ProteinBiomarkers, TumorCaspase 8Gene Expression Regulation, NeoplasticHumansImmunotherapyPyroptosisTumor Microenvironmentbcl-2-Associated X ProteinBiomarkers, TumorCaspase 8GliomaImmunotherapyPyroptosisRisk scoreTumor immune microenvironment

Identifiers

PMID36129672
OpenAlexW4296962925

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.