Evidence map›Paper›PMID 36129135›Full record

ArticleJournal of biomolecular structure & dynamics

An integrative reverse vaccinology, immunoinformatic, docking and simulation approaches towards designing of multi-epitopes based vaccine against monkeypox virus.

Asad Ullah, Farah Ali Shahid, Mahboob Ul Haq, Muhammad Tahir Ul Qamar, Muhammad Irfan, Bilal Shaker, Sajjad Ahmad, Faris Alrumaihi, Khaled S Allemailem, Ahmad Almatroudi

Open access · greenAbstract read
In one paragraph

Article in Journal of biomolecular structure & dynamics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 52 citations in OpenAlex.

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  8. Design of an Epitope-Based Vaccine Against MERS-CoV.Medicina (Kaunas, Lithuania) · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Asad UllahDepartment of Health and Biological Sciences, Abasyn University, Peshawar, Pakistan.
Farah Ali ShahidDepartment of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad, Pakistan.
Mahboob Ul HaqDepartment of Health and Biological Sciences, Abasyn University, Peshawar, Pakistan.
Muhammad Tahir Ul QamarDepartment of Bioinformatics and Biotechnology, Government College University Faisalabad, Faisalabad, Pakistan.
Muhammad IrfanDepartment of Oral Biology, College of Dentistry, University of Florida, Gainesville, FL, USA.
Bilal ShakerDepartment of Biomedical Engineering, Chung-Ang University, Seoul, South Korea.
Sajjad AhmadDepartment of Health and Biological Sciences, Abasyn University, Peshawar, Pakistan.
Faris AlrumaihiDepartment of Medical Laboratories, College of Applied Medical Sciences, Qassim University, Buraydah, Saudi Arabia.
Khaled S AllemailemDepartment of Medical Laboratories, College of Applied Medical Sciences, Qassim University, Buraydah, Saudi Arabia.
Ahmad AlmatroudiDepartment of Medical Laboratories, College of Applied Medical Sciences, Qassim University, Buraydah, Saudi Arabia.ORCID 0000-0002-1491-6402
Abasyn University · PKQassim University · SAGovernment College University, Faisalabad · PKChung-Ang University · KRUniversity of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Monkeypox is a viral zoonotic disease that is caused by the monkeypox virus (MPXV) and is mainly transmitted to human through close contact with an infected person, animal, or fomites which is contaminated by the virus. In the present research work, reverse vaccinology and several other bioinformatics and immunoinformatics tools were utilized to design multi-epitopes-based vaccine against MPXV by exploring three probable antigenic extracellular proteins: cupin domain-containing protein, ABC transporter ATP-binding protein and DUF192 domain-containing protein. Both cellular and humoral immunity induction were the main concerning qualities of the vaccine construct, hence from selected proteins both B and T-cells epitopes were predicted. Antigenicity, allergenicity, toxicity, and water solubility of the predicted epitopes were assessed and only probable antigenic, non-allergic, non-toxic and good water-soluble epitopes were used in the multi-epitopes vaccine construct. The developed vaccine was found to be potentially effective against MPXV and to be highly immunogenic, cytokine-producing, antigenic, non-toxic, non-allergenic, and stable. Additionally, to increase stability and expression efficiency in the host E. coli, disulfide engineering, codon adaptation, and

Indexed as

binding free energies calculationmolecular dockingmolecular dynamic simulationMonkeypox

Identifiers

PMID36129135
PMCPMC9527787
OpenAlexW4296698246

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.