Evidence map›Paper›PMID 36128896›Full record

ArticleMagnetic resonance in medicine2023

Signal intensity informed multi-coil encoding operator for physics-guided deep learning reconstruction of highly accelerated myocardial perfusion CMR.

Omer Burak Demirel, Burhaneddin Yaman, Chetan Shenoy, Steen Moeller, Sebastian Weingärtner, Mehmet Akçakaya

Abstract read
In one paragraph

Article in Magnetic resonance in medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
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  5. Edge Computing for Physics-Driven AI in Computational MRI: A Feasibility Study.International Conference on Future Internet of Things and Cloud : FiCloud. International Conference on Future Internet of Things and Cloud · 2025
    Article
  6. Article
  7. Simultaneous multi-slice cardiac real-time MRI at 0.55T.Magnetic resonance in medicine · 2025
    Article
  8. Article
  9. Time-Embedded Algorithm Unrolling for Computational MRI.Advances in neural information processing systems · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. High-fidelity Database-free Deep Learning Reconstruction for Real-time Cine Cardiac MRI.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2023
    Article
  14. Article
  15. FlowMRI-Net: A generalizable self-supervised 4D flow MRI reconstruction network.Journal of cardiovascular magnetic resonance : official journal of the Society for Cardiovascular Magnetic Resonance
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Omer Burak DemirelDepartment of Electrical and Computer Engineering, University of Minnesota, Minneapolis, Minnesota, USA.ORCID 0000-0003-4726-0590
Burhaneddin YamanDepartment of Electrical and Computer Engineering, University of Minnesota, Minneapolis, Minnesota, USA.ORCID 0000-0003-0791-5900
Chetan ShenoyDepartment of Medicine (Cardiology), University of Minnesota, Minneapolis, Minnesota, USA.
Steen MoellerCenter for Magnetic Resonance Research, University of Minnesota, Minneapolis, Minnesota, USA.ORCID 0000-0003-1698-7260
Sebastian WeingärtnerDepartment of Imaging Physics, Delft University of Technology, Delft, Netherlands.ORCID 0000-0002-0739-6306
Mehmet AkçakayaDepartment of Electrical and Computer Engineering, University of Minnesota, Minneapolis, Minnesota, USA.ORCID 0000-0001-6400-7736

Funding

TRD4 - Ultrahigh Field Engineering and SafetyP41EB027061 · NIBIB · UNIVERSITY OF MINNESOTA · PI Gregory John Metzger · 2019 to 2026
$11.7M
Rapid Comprehensive Cardiac MRI Exam for Diagnosis of Coronary Artery DiseaseR01HL153146 · NHLBI · UNIVERSITY OF MINNESOTA · PI AKCAKAYA, MEHMET · 2020 to 2024
$2.5M
Novel Quantitative MRI Techniques for the Assessment of Cardiac Fibrosis without Gadolinium ContrastR21EB028369 · NIBIB · UNIVERSITY OF MINNESOTA · PI AKCAKAYA, MEHMET · 2020 to 2022
$602k
NHLBI NIH HHS R01 HL153146NIBIB NIH HHS P41 EB027061NIBIB NIH HHS R21 EB028369
6 · The paper itself

Abstract

purposeTo develop a physics-guided deep learning (PG-DL) reconstruction strategy based on a signal intensity informed multi-coil (SIIM) encoding operator for highly-accelerated simultaneous multislice (SMS) myocardial perfusion cardiac MRI (CMR).

methodsFirst-pass perfusion CMR acquires highly-accelerated images with dynamically varying signal intensity/SNR following the administration of a gadolinium-based contrast agent. Thus, using PG-DL reconstruction with a conventional multi-coil encoding operator leads to analogous signal intensity variations across different time-frames at the network output, creating difficulties in generalization for varying SNR levels. We propose to use a SIIM encoding operator to capture the signal intensity/SNR variations across time-frames in a reformulated encoding operator. This leads to a more uniform/flat contrast at the output of the PG-DL network, facilitating generalizability across time-frames. PG-DL reconstruction with the proposed SIIM encoding operator is compared to PG-DL with conventional encoding operator, split slice-GRAPPA, locally low-rank (LLR) regularized reconstruction, low-rank plus sparse (L + S) reconstruction, and regularized ROCK-SPIRiT.

resultsResults on highly accelerated free-breathing first pass myocardial perfusion CMR at three-fold SMS and four-fold in-plane acceleration show that the proposed method improves upon the reconstruction methods use for comparison. Substantial noise reduction is achieved compared to split slice-GRAPPA, and aliasing artifacts reduction compared to LLR regularized reconstruction, L + S reconstruction and PG-DL with conventional encoding. Furthermore, a qualitative reader study indicated that proposed method outperformed all methods.

conclusionPG-DL reconstruction with the proposed SIIM encoding operator improves generalization across different time-frames /SNRs in highly accelerated perfusion CMR.

Indexed as

Deep LearningImage Processing, Computer-AssistedArtifactsMagnetic Resonance ImagingPerfusionPhysicsaccelerated imagingcardiac MRIcoil mapsdeep learningimage reconstructionmyocardial perfusion

Identifiers

PMID36128896
PMCPMC9617789

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.