Evidence map›Paper›PMID 36127707›Full record

ArticleBMC biology2022

Combined nanometric and phylogenetic analysis of unique endocytic compartments in Giardia lamblia sheds light on the evolution of endocytosis in Metamonada.

Rui Santos, Ásgeir Ástvaldsson, Shweta V Pipaliya, Jon Paulin Zumthor, Joel B Dacks, Staffan Svärd, Adrian B Hehl, Carmen Faso

Open access · goldAbstract read
In one paragraph

Article in BMC biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Endocytosis in anaerobic parasitic protists.Memorias do Instituto Oswaldo Cruz · 2024
    Review
  5. Article
  6. Article
  7. Lessons from the deep: mechanisms behind diversification of eukaryotic protein complexes.Biological reviews of the Cambridge Philosophical Society · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 5 countries.

Rui SantosInstitute of Parasitology, University of Zürich, Winterthurerstrasse 266a, 8057, Zürich, Switzerland.ORCID 0000-0001-6003-9079
Ásgeir ÁstvaldssonDepartment of Cell and Molecular Biology, University of Uppsala, Husargatan 3, 752 37, Uppsala, Sweden.
Shweta V PipaliyaDivision of Infectious Diseases, Department of Medicine, University of Alberta, Edmonton, Alberta, Canada.ORCID 0000-0003-0630-4120
Jon Paulin ZumthorAmt für Lebensmittelsicherheit und Tiergesundheit Graubünden, Chur, Switzerland.
Joel B DacksDivision of Infectious Diseases, Department of Medicine, University of Alberta, Edmonton, Alberta, Canada.ORCID 0000-0003-4520-5694
Staffan SvärdDepartment of Cell and Molecular Biology, University of Uppsala, Husargatan 3, 752 37, Uppsala, Sweden.ORCID 0000-0002-7392-1746
Adrian B Hehl *Institute of Parasitology, University of Zürich, Winterthurerstrasse 266a, 8057, Zürich, Switzerland.ORCID 0000-0002-2110-4445
Carmen Faso *Institute of Cell Biology, University of Bern, Bern, Switzerland. carmen.faso@unibe.ch.ORCID 0000-0002-1831-9365
University of Alberta · CAUniversity of Zurich · CHUppsala University · SEUniversity of Bern · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGiardia lamblia, a parasitic protist of the Metamonada supergroup, has evolved one of the most diverged endocytic compartment systems investigated so far. Peripheral endocytic compartments, currently known as peripheral vesicles or vacuoles (PVs), perform bulk uptake of fluid phase material which is then digested and sorted either to the cell cytosol or back to the extracellular space.

resultsHere, we present a quantitative morphological characterization of these organelles using volumetric electron microscopy and super-resolution microscopy (SRM). We defined a morphological classification for the heterogenous population of PVs and performed a comparative analysis of PVs and endosome-like organelles in representatives of phylogenetically related taxa, Spironucleus spp. and Tritrichomonas foetus. To investigate the as-yet insufficiently understood connection between PVs and clathrin assemblies in G. lamblia, we further performed an in-depth search for two key elements of the endocytic machinery, clathrin heavy chain (CHC) and clathrin light chain (CLC), across different lineages in Metamonada. Our data point to the loss of a bona fide CLC in the last Fornicata common ancestor (LFCA) with the emergence of a protein analogous to CLC (GlACLC) in the Giardia genus. Finally, the location of clathrin in the various compartments was quantified.

conclusionsTaken together, this provides the first comprehensive nanometric view of Giardia's endocytic system architecture and sheds light on the evolution of GlACLC analogues in the Fornicata supergroup and, specific to Giardia, as a possible adaptation to the formation and maintenance of stable clathrin assemblies at PVs.

Indexed as

Giardia lambliaClathrinClathrin Heavy ChainsClathrin Light ChainsEndocytosisPhylogenyClathrinClathrin Heavy ChainsClathrin Light ChainsConvergent evolutionEndocytosisGiardiaMetamonadaPeripheral endocytic compartments (PECs)Peripheral vacuolesSpironucleusSuper-resolution microscopy (SRM)TritrichomonasVolumetric electron microscopy

Identifiers

PMID36127707
PMCPMC9490929
OpenAlexW4296472985

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.