Evidence map›Paper›PMID 36127429›Full record

ArticleMolecular psychiatry2023

Mitochondrial DNA variation in Alzheimer's disease reveals a unique microprotein called SHMOOSE.

Brendan Miller, Su-Jeong Kim, Hemal H Mehta, Kevin Cao, Hiroshi Kumagai, Neehar Thumaty, Naphada Leelaprachakul, Regina Gonzalez Braniff, Henry Jiao, Joan Vaughan and 18 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Molecular psychiatry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 51 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 1 pooled it
4.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. Mitochondrial-derived microproteins in lung disease: insights and implications.American journal of physiology. Lung cellular and molecular physiology · 2026
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Mitochondrial Microproteins: Emerging Regulators in Neurodevelopment and Neurodegeneration.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  17. Review
  18. Review
  19. Review
  20. Eukaryotic Microproteins.Annual review of biochemistry · 2025
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors at 4 institutions in 1 country.

Brendan MillerLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0002-7461-7973
Su-Jeong KimLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Hemal H MehtaLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Kevin CaoLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Hiroshi KumagaiLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Neehar ThumatyLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Naphada LeelaprachakulLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Regina Gonzalez BraniffLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Henry JiaoLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Joan VaughanClayton Foundation Laboratories for Peptide Biology, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Jolene DiedrichClayton Foundation Laboratories for Peptide Biology, The Salk Institute for Biological Studies, La Jolla, CA, USA.
Alan SaghatelianClayton Foundation Laboratories for Peptide Biology, The Salk Institute for Biological Studies, La Jolla, CA, USA.ORCID 0000-0002-0427-563X
Thalida E ArpawongLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0001-9671-9535
Eileen M CrimminsLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Nilüfer Ertekin-TanerMayo Clinic, Department of Neuroscience, Jacksonville, FL, USA.ORCID 0000-0003-4436-8889
Meral A TubiImaging Genetics Center, Institute for Neuroimaging and Informatics, University of Southern California, Los Angeles, CA, USA.
Evan T HareImaging Genetics Center, Institute for Neuroimaging and Informatics, University of Southern California, Los Angeles, CA, USA.
Meredith N BraskieImaging Genetics Center, Institute for Neuroimaging and Informatics, University of Southern California, Los Angeles, CA, USA.
Léa Décarie-SpainHuman and Evolutionary Biology Section, Department of Biological Sciences, Dornsife College of Letters, Arts and Sciences, University of Southern California, Los Angeles, CA, USA.
Scott E KanoskiNeuroscience Graduate Program, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0001-9526-206X
Francine GrodsteinRush Alzheimer's Disease Center, Rush University Medical Center, Chicago, IL, USA.
David A BennettRush Alzheimer's Disease Center, Rush University Medical Center, Chicago, IL, USA.
Lu ZhaoLaboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of University of Southern California, Los Angeles, CA, USA.
Arthur W TogaLaboratory of Neuro Imaging, USC Stevens Neuroimaging and Informatics Institute, Keck School of Medicine of University of Southern California, Los Angeles, CA, USA.ORCID 0000-0001-7902-3755
Junxiang WanLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.
Kelvin YenLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA.ORCID 0000-0003-4595-971X
Pinchas CohenLeonard Davis School of Gerontology, University of Southern California, Los Angeles, CA, USA. hassy@usc.edu.ORCID 0000-0002-0035-8366
Alzheimer’s Disease Neuroimaging Initiative*
University of Southern California · USSalk Institute for Biological Studies · USRush University Medical Center · USMayo Clinic in Florida · US

Funding

Alzheimer's Disease Neuroimaging Initiative - SupplementU01AG024904 · NIA · NORTHERN CALIFORNIA INSTITUTE RES &EDUC · PI WEINER, MICHAEL W · 2004 to 2015
$121.0M
SUPPLEMENT TO RUSH ALZHEIMERS DISEASE CENTER COREP30AG010161 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 1991 to 2020
$49.1M
EPIDEMIOLOGY OF NEURAL RESERVE AND NEUROBIOLOGY IN AGINGR01AG017917 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 2001 to 2023
$43.3M
USCADRC Diversity Supplement PachicanoP30AG066530 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI HELENA Chang CHUI · 2020 to 2026
$27.8M
Rush Alzheimer's Disease Research CenterP30AG072975 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI Lisa L Barnes, Julie A. Schneider · 2021 to 2026
$24.7M
RISK FACTORS, PATHOLOGY, AND CLINICAL EXPRESSIONS OF ADR01AG015819 · NIA · RUSH UNIVERSITY MEDICAL CENTER · PI BENNETT, DAVID ALAN · 1998 to 2024
$21.4M
Multi-omic network-directed proteoform discovery, dissection and functional validation to prioritize novel AD therapeutic targetsU01AG061356 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI BENNETT, DAVID ALAN, DE JAGER, PHILIP L · 2018 to 2022
$13.7M
RESEARCH TRAINING IN GERONTOLOGYT32AG000037 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI JENNIFER A AILSHIRE, EILEEN M CRIMMINS · 1985 to 2026
$13.2M
Role of the Mitochondrial Peptide Humanin in Regulating Aging and HealthspanP01AG055369 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BRANDHORST, SEBASTIAN, COHEN, PINCHAS · 2018 to 2023
$12.4M
USC-Buck Institute Nathan Shock Admin CoreP30AG068345 · NIA · BUCK INSTITUTE FOR RESEARCH ON AGING · PI LITHGOW, GORDON J · 2020 to 2024
$5.0M
Ethnic-specific Effects of Mitochondrial DNA Variants and Environmental Factors on Cognitive Functioning and DementiaR01AG068405 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI COHEN, PINCHAS, CRIMMINS, EILEEN M · 2020 to 2024
$3.6M
Humanin is an AD resilience factor through its interaction with APOE4RF1AG061834 · NIA · UNIVERSITY OF SOUTHERN CALIFORNIA · PI COHEN, PINCHAS · 2018 to 2018
$3.3M
NIA NIH HHS F31 AG059356NIA NIH HHS P01 AG055369NIA NIH HHS P30 AG010161NIA NIH HHS P30 AG066530NIA NIH HHS P30 AG068345NIA NIH HHS P30 AG072975NIA NIH HHS R01 AG015819NIA NIH HHS R01 AG017917NIA NIH HHS R01 AG068405NIA NIH HHS R01 AG069698NIA NIH HHS R56 AG062693NIA NIH HHS RF1 AG061834NIA NIH HHS T32 AG000037NIA NIH HHS U01 AG024904NIA NIH HHS U01 AG061356NIDDK NIH HHS R01 DK118402
6 · The paper itself

Abstract

Mitochondrial DNA variants have previously associated with disease, but the underlying mechanisms have been largely elusive. Here, we report that mitochondrial SNP rs2853499 associated with Alzheimer's disease (AD), neuroimaging, and transcriptomics. We mapped rs2853499 to a novel mitochondrial small open reading frame called SHMOOSE with microprotein encoding potential. Indeed, we detected two unique SHMOOSE-derived peptide fragments in mitochondria by using mass spectrometry-the first unique mass spectrometry-based detection of a mitochondrial-encoded microprotein to date. Furthermore, cerebrospinal fluid (CSF) SHMOOSE levels in humans correlated with age, CSF tau, and brain white matter volume. We followed up on these genetic and biochemical findings by carrying out a series of functional experiments. SHMOOSE acted on the brain following intracerebroventricular administration, differentiated mitochondrial gene expression in multiple models, localized to mitochondria, bound the inner mitochondrial membrane protein mitofilin, and boosted mitochondrial oxygen consumption. Altogether, SHMOOSE has vast implications for the fields of neurobiology, Alzheimer's disease, and microproteins.

Indexed as

Alzheimer DiseaseAmyloid beta-PeptidesBiomarkersDNA, MitochondrialHumansMicropeptidesPeptide Fragmentstau ProteinsAmyloid beta-PeptidesBiomarkersDNA, MitochondrialMicropeptidesPeptide Fragmentstau Proteins

Identifiers

PMID36127429
PMCPMC10027624
OpenAlexW4296776308

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.