Evidence map›Paper›PMID 36126041›Full record

ArticlePloS one2022

First wave COVID-19 pandemic in Senegal: Epidemiological and clinical characteristics.

Maryam Diarra, Aliou Barry, Ndongo Dia, Mamadou Diop, Ibrahima Sonko, Samba Sagne, Fatoumata Diene Sarr, Cheikh Talla, Adama Tall, Joseph Faye and 23 more

Abstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Maryam DiarraEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.ORCID 0000-0001-9110-4435
Aliou BarryEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Ndongo DiaVirology Department, Institut Pasteur de Dakar, Dakar, Senegal.
Mamadou DiopEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Ibrahima SonkoCentre des Opérations d'Urgence Sanitaire (COUS), Ministry of Health, Dakar, Senegal.
Samba SagneEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Fatoumata Diene SarrEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Cheikh TallaEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Adama TallEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Joseph FayeEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Boly DiopDivision Surveillance Epidémiologique, Direction de la Prévention, Ministry of Health, Dakar, Senegal.
Cheikh Tidiane DiagneDiatropix Unit, Institut Pasteur de Dakar, Dakar, Senegal.
Aboubacry GayeEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Amadou DialloEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.ORCID 0000-0002-8584-9972
Rose MbayeEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.ORCID 0000-0003-1523-7919
Mamadou CisseEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Fabien TaiebEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Oumar FayeVirology Department, Institut Pasteur de Dakar, Dakar, Senegal.
Ndeye Aissatou LakheService des Maladies Infectieuses, Fann Hospital, Dakar, Senegal.
Ba Papa SambaHospital Militar Principal, Dakar, Senegal.
Khardiata DialloService des Maladies Infectieuses, Fann Hospital, Dakar, Senegal.
Ndeye Maguette FallService des Maladies Infectieuses, Fann Hospital, Dakar, Senegal.
Aboubakar Sadikh BadianeService des Maladies Infectieuses, Fann Hospital, Dakar, Senegal.
Louise FortesHospital Dalal Jam, Dakar, Senegal.
Moustapha DiopHospital Militar Principal, Dakar, Senegal.
Daouda ThioubService des Maladies Infectieuses, Fann Hospital, Dakar, Senegal.
Alioune Badara LyCentre des Opérations d'Urgence Sanitaire (COUS), Ministry of Health, Dakar, Senegal.
Ousmane FayeVirology Department, Institut Pasteur de Dakar, Dakar, Senegal.
Moussa SeydiService des Maladies Infectieuses, Fann Hospital, Dakar, Senegal.
Abdoulaye BoussoCentre des Opérations d'Urgence Sanitaire (COUS), Ministry of Health, Dakar, Senegal.
Amadou A SallVirology Department, Institut Pasteur de Dakar, Dakar, Senegal.
Cheikh LoucoubarEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar, Senegal.
Senegalese District Medical Officers

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe novel coronavirus disease 2019 (COVID-19) pandemic has spread from China to the rest of the world. Africa seems less impacted with lower number of cases and deaths than other continents. Senegal recorded its first case on March 2, 2020. We present here data collected from March 2 to October 31, 2020 in Senegal.

methodsSocio-demographic, epidemiological, clinical and virological information were collected on suspected cases. To determine factors associated with diagnosed infection, symptomatic disease and death, multivariable binary logistic regression and log binomial models were used. Epidemiological parameters such as the reproduction number and growth rate were estimated.

results67,608 suspected cases were tested by the IPD laboratories (13,031 positive and 54,577 negative). All age categories were associated with SARS-CoV-2 infection, but also patients having diabetes or hypertension or other cardiovascular diseases. With diagnosed infection, patients over 65 years and those with hypertension and cardiovascular disease and diabetes were highly associated with death. Patients with co-morbidities were associated with symptomatic disease, but only the under 15 years were not associated with. Among infected, 27.67% were asymptomatic (40.9% when contacts were systematically tested; 12.11% when only symptomatic or high-risk contacts were tested). Less than 15 years-old were mostly asymptomatic (63.2%). Dakar accounted for 81.4% of confirmed cases. The estimated mean serial interval was 5.57 (± 5.14) days. The average reproduction number was estimated at 1.161 (95%CI: 1.159-1.162), the growth rate was 0.031 (95%CI: 0.028-0.034) per day.

conclusionsOur findings indicated that factors associated with symptomatic COVID-19 and death are advanced age (over 65 years-old) and comorbidities such as diabetes and hypertension and cardiovascular disease.

Indexed as

Cardiovascular DiseasesCOVID-19Diabetes MellitusHypertensionAdolescentAgedHumansPandemicsSARS-CoV-2Senegal

Identifiers

PMID36126041
PMCPMC9488827

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.