ArticleMolecular biology reports2022
Pangenomes-identified singletons for designing specific primers to identify bacterial strains in a plant growth-promoting consortium.
Article in Molecular biology reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.
What it found
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The trial behind it
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Who cites it
2 citing papers in PubMed, 5 citations in OpenAlex.
- The pangenome: a statistical model, not a fixed biological property.Bioinformatics advances · 2026Review
- Review
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Authors and funding
4 authors at 2 institutions in 1 country.
Funding
Abstract
backgroundThe use of plant growth-promoting microorganisms represents a sustainable way to increase agricultural yields and plant health. Thus, the identification and tracking of these microorganisms are determinants for validating their positive effects on crops. Pangenomes allow the identification of singletons that can be used to design specific primers for the detection of the studied strains.
objectiveThis study aimed to establish a strategy based on the use of whole-genome sequencing and pangenomes for designing and validating primer sets for detecting Bacillus cabrialesii TE3 METHODS AND
resultsThe identification of singletons of TE3
conclusionsThe use of pangenomes allowed the distinction of unique sequences that enables the design of primers for specific identification of the studied bacterial strains. This strategy can be widely used for the design of primer sets to detect other strains of interest for combating biopiracy, and commercial protection of biological products, among other applications.
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