Evidence map›Paper›PMID 36125315›Full record

ArticleMicrobiology spectrum2022

Single-Cell Infection of Influenza A Virus Using Drop-Based Microfluidics.

Emma Kate Loveday, Humberto S Sanchez, Mallory M Thomas, Connie B Chang

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Tropism for ciliated cells is the dominant driver of influenza viral burst size in the human airway.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Respiratory viruses: New frontiers-a Keystone Symposia report.Annals of the New York Academy of Sciences · 2023
    Article
  11. High-throughput droplet-based analysis of influenza A virus genetic reassortment by single-virus RNA sequencing.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Emma Kate LovedayCenter for Biofilm Engineering, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.ORCID 0000-0002-1154-7728
Humberto S SanchezCenter for Biofilm Engineering, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Mallory M ThomasCenter for Biofilm Engineering, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.ORCID 0000-0001-7218-2868
Connie B ChangCenter for Biofilm Engineering, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.ORCID 0000-0001-9555-8223
Montana State University · USMayo Clinic · US

Funding

High-throughput droplet qRT-PCR microfluidic platform for quantification of virus from single cellsR56AI156137 · NIAID · MONTANA STATE UNIVERSITY - BOZEMAN · PI CHANG, CONNIE B · 2021 to 2021
$360k
NIAID NIH HHS R56 AI156137
6 · The paper itself

Abstract

Drop-based microfluidics has revolutionized single-cell studies and can be applied toward analyzing tens of thousands to millions of single cells and their products contained within picoliter-sized drops. Drop-based microfluidics can shed insight into single-cell virology, enabling higher-resolution analysis of cellular and viral heterogeneity during viral infection. In this work, individual A549, MDCK, and siat7e cells were infected with influenza A virus (IAV) and encapsulated into 100-μm-size drops. Initial studies of uninfected cells encapsulated in drops demonstrated high cell viability and drop stability. Cell viability of uninfected cells in the drops remained above 75%, and the average drop radii changed by less than 3% following cell encapsulation and incubation over 24 h. Infection parameters were analyzed over 24 h from individually infected cells in drops. The number of IAV viral genomes and infectious viruses released from A549 and MDCK cells in drops was not significantly different from bulk infection as measured by reverse transcriptase quantitative PCR (RT-qPCR) and plaque assay. The application of drop-based microfluidics in this work expands the capacity to propagate IAV viruses and perform high-throughput analyses of individually infected cells.

Indexed as

Influenza A virusInfluenza, HumanCell LineGenome, ViralHumansMicrofluidicsRNA-Directed DNA PolymeraseRNA-Directed DNA Polymerasedropsinfluenzamicrofluidicssingle cell

Identifiers

PMID36125315
PMCPMC9603537
OpenAlexW4296782782

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.