Evidence map›Paper›PMID 36125261›Full record

ArticleeLife2022

Progressive enhancement of kinetic proofreading in T cell antigen discrimination from receptor activation to DAG generation.

Derek M Britain, Jason P Town, Orion David Weiner

Open access · goldAbstract read
In one paragraph

Article in eLife, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. PmrA Mutations in Drug-ResistantMicroorganisms · 2025
    Article
  5. Parallel reactions on a single T cell receptor offer a robust kinetic proofreading mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Optogenetic engineering for precision cancer immunotherapy.Trends in pharmacological sciences · 2025
    Review
  7. Proofreading and single-molecule sensitivity in T cell receptor signaling by condensate nucleation.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Review
  9. Flexibility and sensitivity in gene regulation out of equilibrium.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Mechanical force matters in early T cell activation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  11. Measuring and modeling the dynamics of mitotic error correction.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  12. Article
  13. Review
  14. Early Chromatin Remodeling Events in Acutely Stimulated CD8The Yale journal of biology and medicine · 2023
    Article
  15. Article
  16. Article
  17. Proofreading does not result in more reliable ligand discrimination in receptor signaling due to its inherent stochasticity.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Review
  19. Design and engineering of light-sensitive protein switches.Current opinion in structural biology · 2022
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Derek M BritainCardiovascular Research Institute and Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, United States.ORCID 0000-0002-3139-3797
Jason P TownCardiovascular Research Institute and Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, United States.
Orion David WeinerCardiovascular Research Institute and Department of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, United States.ORCID 0000-0002-1778-6543
University of California, San Francisco · US

Funding

Cellular Decision Making Diversity SupplementR35GM118167 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Orion D Weiner · 2016 to 2026
$10.3M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008284 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORTEMME, TANJA · 1988 to 2022
$10.1M
NIGMS NIH HHS R35 GM118167NIGMS NIH HHS T32 GM008284
6 · The paper itself

Abstract

T cells use kinetic proofreading to discriminate antigens by converting small changes in antigen-binding lifetime into large differences in cell activation, but where in the signaling cascade this computation is performed is unknown. Previously, we developed a light-gated immune receptor to probe the role of ligand kinetics in T cell antigen signaling. We found significant kinetic proofreading at the level of the signaling lipid diacylglycerol (DAG) but lacked the ability to determine where the multiple signaling steps required for kinetic discrimination originate in the upstream signaling cascade (Tiseher and Weiner, 2019). Here, we uncover where kinetic proofreading is executed by adapting our optogenetic system for robust activation of early signaling events. We find the strength of kinetic proofreading progressively increases from Zap70 recruitment to LAT clustering to downstream DAG generation. Leveraging the ability of our system to rapidly disengage ligand binding, we also measure slower reset rates for downstream signaling events. These data suggest a distributed kinetic proofreading mechanism, with proofreading steps both at the receptor and at slower resetting downstream signaling complexes that could help balance antigen sensitivity and discrimination.

Indexed as

AntigensDiglyceridesKineticsLigandsReceptors, Antigen, T-CellT-LymphocytesAntigensDiglyceridesLigandsReceptors, Antigen, T-Cellantigen discriminationchimeric antigen receptorhumanimmunologyinflammationkinetic proofreadingLOV2optogeneticsphysics of living systemsT cells

Identifiers

PMID36125261
PMCPMC9536835
OpenAlexW4297891322

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.