Evidence map›Paper›PMID 36123960›Full record

ArticleJournal of Korean medical science2022

Efficient Segmentation for Left Atrium With Convolution Neural Network Based on Active Learning in Late Gadolinium Enhancement Magnetic Resonance Imaging.

Yongwon Cho, Hyungjoon Cho, Jaemin Shim, Jong-Il Choi, Young-Hoon Kim, Namkug Kim, Yu-Whan Oh, Sung Ho Hwang

Abstract read
In one paragraph

Article in Journal of Korean medical science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yongwon ChoDepartment of Radiology, Korea University Anam Hospital, Seoul,Korea.ORCID https://orcid.org/0000-0001-8092-5799
Hyungjoon ChoDepartment of Radiology, Korea University Anam Hospital, Seoul,Korea.ORCID https://orcid.org/0000-0002-0676-121X
Jaemin ShimDivision of Cardiology, Department of Internal Medicine, Korea University Anam Hospital, Seoul,Korea.ORCID https://orcid.org/0000-0001-8251-1522
Jong-Il ChoiDivision of Cardiology, Department of Internal Medicine, Korea University Anam Hospital, Seoul,Korea.ORCID https://orcid.org/0000-0001-6617-508X
Young-Hoon KimDivision of Cardiology, Department of Internal Medicine, Korea University Anam Hospital, Seoul,Korea.ORCID https://orcid.org/0000-0002-4254-647X
Namkug KimDepartment of Convergence Medicine, Asan Medical Center, University of Ulsan College of Medicine, Seoul,Korea. namkugkim@gmail.com.ORCID https://orcid.org/0000-0002-3438-2217
Yu-Whan OhDepartment of Radiology, Korea University Anam Hospital, Seoul,Korea.ORCID https://orcid.org/0000-0003-2646-0497
Sung Ho HwangDepartment of Radiology, Korea University Anam Hospital, Seoul,Korea. sungho77@korea.ac.kr.ORCID https://orcid.org/0000-0003-1850-0751

Funding

National Research Foundation of Korea NRF-2021K1A3A1A88101097
6 · The paper itself

Abstract

backgroundTo propose fully automatic segmentation of left atrium using active learning with limited dataset in late gadolinium enhancement in cardiac magnetic resonance imaging (LGE-CMRI).

methodsAn active learning framework was developed to segment the left atrium in cardiac LGE-CMRI. Patients (n = 98) with atrial fibrillation from the Korea University Anam Hospital were enrolled. First, 20 cases were delineated for ground truths by two experts and used for training a draft model. Second, the 20 cases from the first step and 50 new cases, corrected in a human-in-the-loop manner after predicting using the draft model, were used to train the next model; all 98 cases (70 cases from the second step and 28 new cases) were trained. An additional 20 LGE-CMRI were evaluated in each step.

resultsThe Dice coefficients for the three steps were 0.85 ± 0.06, 0.89 ± 0.02, and 0.90 ± 0.02, respectively. The biases (95% confidence interval) in the Bland-Altman plots of each step were 6.36% (-14.90-27.61), 6.21% (-9.62-22.03), and 2.68% (-8.57-13.93). Deep active learning-based annotation times were 218 ± 31 seconds, 36.70 ± 18 seconds, and 36.56 ± 15 seconds, respectively.

conclusionDeep active learning reduced annotation time and enabled efficient training on limited LGE-CMRI.

Indexed as

Contrast MediaGadoliniumHeart AtriaHumansMagnetic Resonance ImagingNeural Networks, ComputerContrast MediaGadoliniumActive LearningCardiac Image AnalysisConvolutional Neural NetworkDeep LearningHuman-in-the-LoopMagnetic Resonance Images

Identifiers

PMID36123960
PMCPMC9485068

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.