Evidence map›Paper›PMID 36123745›Full record

ArticleBMC medical informatics and decision making2022

An ensemble learning with active sampling to predict the prognosis of postoperative non-small cell lung cancer patients.

Danqing Hu, Huanyao Zhang, Shaolei Li, Huilong Duan, Nan Wu, Xudong Lu

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Article in BMC medical informatics and decision making, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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3 · Its place in the literature

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3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Danqing HuCollege of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China.
Huanyao ZhangCollege of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China.
Shaolei LiDepartment of Thoracic Surgery II, Peking University Cancer Hospital and Institute, Beijing, China.
Huilong DuanCollege of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China.
Nan WuDepartment of Thoracic Surgery II, Peking University Cancer Hospital and Institute, Beijing, China. nanwu@bjmu.edu.cn.
Xudong LuCollege of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China. lvxd@zju.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLung cancer is the leading cause of cancer death worldwide. Prognostic prediction plays a vital role in the decision-making process for postoperative non-small cell lung cancer (NSCLC) patients. However, the high imbalance ratio of prognostic data limits the development of effective prognostic prediction models.

methodsIn this study, we present a novel approach, namely ensemble learning with active sampling (ELAS), to tackle the imbalanced data problem in NSCLC prognostic prediction. ELAS first applies an active sampling mechanism to query the most informative samples to update the base classifier to give it a new perspective. This training process is repeated until no enough samples are queried. Next, an internal validation set is employed to evaluate the base classifiers, and the ones with the best performances are integrated as the ensemble model. Besides, we set up multiple initial training data seeds and internal validation sets to ensure the stability and generalization of the model.

resultsWe verified the effectiveness of the ELAS on a real clinical dataset containing 1848 postoperative NSCLC patients. Experimental results showed that the ELAS achieved the best averaged 0.736 AUROC value and 0.453 AUPRC value for 6 prognostic tasks and obtained significant improvements in comparison with the SVM, AdaBoost, Bagging, SMOTE and TomekLinks.

conclusionsWe conclude that the ELAS can effectively alleviate the imbalanced data problem in NSCLC prognostic prediction and demonstrates good potential for future postoperative NSCLC prognostic prediction.

Indexed as

Carcinoma, Non-Small-Cell LungLung NeoplasmsAlgorithmsHumansMachine LearningPrognosisActive samplingEnsemble learningNon-small cell lung cancerPrognostic prediction

Identifiers

PMID36123745
PMCPMC9487160

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