Evidence map›Paper›PMID 36123605›Full record

ArticleParasites & vectors2022

Large-scale and small-scale population genetic structure of the medically important gastropod species Bulinus truncatus (Gastropoda, Heterobranchia).

Tim Maes, Zoë De Corte, Carl Vangestel, Massimiliano Virgilio, Nathalie Smitz, Félicité F Djuikwo-Teukeng, Maria Ioanna Papadaki, Tine Huyse

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Tim MaesDepartment of Biology, Katholieke Universiteit Leuven, Ch. Deberiotstraat 32, 3000, Leuven, Belgium. tim.maes@kuleuven.be.ORCID http://orcid.org/0000-0002-2582-0959
Zoë De CorteRoyal Museum for Central Africa, Leuvensesteenweg 13, 3080, Tervuren, Belgium.ORCID http://orcid.org/0000-0001-9455-6963
Carl VangestelRoyal Belgian Institute of Natural Sciences, Vautierstraat 29, 1000, Brussels, Belgium.ORCID http://orcid.org/0000-0003-1024-8213
Massimiliano VirgilioRoyal Museum for Central Africa, Leuvensesteenweg 13, 3080, Tervuren, Belgium.ORCID http://orcid.org/0000-0002-1323-6886
Nathalie SmitzRoyal Museum for Central Africa, Leuvensesteenweg 13, 3080, Tervuren, Belgium.ORCID http://orcid.org/0000-0001-5155-0801
Félicité F Djuikwo-TeukengFaculty of Health Sciences, University of Montagnes, P.O Box 208, Banganté, Cameroon.ORCID http://orcid.org/0000-0003-0380-7080
Maria Ioanna PapadakiDepartment of Microbiology, Immunology and Transplantation, Rega Institute for Medical Research, Katholieke Universiteit Leuven, Herestraat 49, 3000, Leuven, Belgium.ORCID http://orcid.org/0000-0003-4262-4498
Tine HuyseDepartment of Biology, Katholieke Universiteit Leuven, Ch. Deberiotstraat 32, 3000, Leuven, Belgium.ORCID http://orcid.org/0000-0001-8164-9757
Royal Museum for Central Africa · BEInstitute of Natural Sciences · BERega Institute for Medical Research · BEUniversité des Montagnes · CM

Funding

Fonds Wetenschappelijk Onderzoek 1S86319N
6 · The paper itself

Abstract

backgroundGastropod snails remain strongly understudied, despite their important role in transmitting parasitic diseases. Knowledge of their distribution and population dynamics increases our understanding of the processes driving disease transmission. We report the first study to use high-throughput sequencing (HTS) to elucidate the population genetic structure of the hermaphroditic snail Bulinus truncatus (Gastropoda, Heterobranchia) on a regional (17-150 km) and inter-regional (1000-5400 km) scale. This snail species acts as an intermediate host of Schistosoma haematobium and Schistosoma bovis, which cause human and animal schistosomiasis respectively.

methodsBulinus truncatus snails were collected in Senegal, Cameroon, Egypt and France and identified through DNA barcoding. A single-end genotyping-by-sequencing (GBS) library, comprising 87 snail specimens from the respective countries, was built and sequenced on an Illumina HiSeq 2000 platform. Reads were mapped against S. bovis and S. haematobium reference genomes to identify schistosome infections, and single nucleotide polymorphisms (SNPs) were scored using the Stacks pipeline. These SNPs were used to estimate genetic diversity, assess population structure and construct phylogenetic trees of B. truncatus.

resultsA total of 10,750 SNPs were scored and used in downstream analyses. The phylogenetic analysis identified five clades, each consisting of snails from a single country but with two distinct clades within Senegal. Genetic diversity was low in all populations, reflecting high selfing rates, but varied between locations due to habitat variability. Significant genetic differentiation and isolation by distance patterns were observed at both spatial scales, indicating that gene flow is not strong enough to counteract the effects of population bottlenecks, high selfing rates and genetic drift. Remarkably, the population genetic differentiation on a regional scale (i.e. within Senegal) was as large as that between populations on an inter-regional scale. The blind GBS technique was able to pick up parasite DNA in snail tissue, demonstrating the potential of HTS techniques to further elucidate the role of snail species in parasite transmission.

conclusionsHTS techniques offer a valuable toolbox to further investigate the population genetic patterns of intermediate schistosome host snails and the role of snail species in parasite transmission.

Indexed as

BulinusGastropodaAnimalsGenetics, PopulationHumansPhylogenySchistosoma haematobiumBulinus truncatusGenotyping-by-sequencingIsolation by distancePhylogeographyPopulation structureSelfing

Identifiers

PMID36123605
PMCPMC9484234
OpenAlexW4296348711

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.