Evidence map›Paper›PMID 36123439›Full record

ArticleNature microbiology2022

Pseudomonas putida mediates bacterial killing, biofilm invasion and biocontrol with a type IVB secretion system.

Gabriela Purtschert-Montenegro, Gerardo Cárcamo-Oyarce, Marta Pinto-Carbó, Kirsty Agnoli, Aurélien Bailly, Leo Eberl

Abstract read
In one paragraph

Article in Nature microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Review
  2. Article
  3. Carbapenem-ResistantAntibiotics (Basel, Switzerland) · 2026
    Review
  4. Pear Scab Disease Suppression byPlants (Basel, Switzerland) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Dissecting the antibacterial functions of the T6SS-2 cluster inApplied and environmental microbiology · 2025
    Article
  11. Article
  12. Inhibition of RNase to Attenuate Fungal-Manipulated Rhizosphere Microbiome and Diseases.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  13. Article
  14. The type IV secretion system ofMicrobial genomics · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Journal of bacteriology · 2024
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Gabriela Purtschert-Montenegro *Department of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.
Gerardo Cárcamo-Oyarce *Department of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.
Marta Pinto-CarbóDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.
Kirsty AgnoliDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.
Aurélien BaillyDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland.
Leo EberlDepartment of Plant and Microbial Biology, University of Zurich, Zurich, Switzerland. leberl@botinst.uzh.ch.ORCID http://orcid.org/0000-0002-7241-0864

Funding

Swiss National Science Foundation 169307
6 · The paper itself

Abstract

Many bacteria utilize contact-dependent killing machineries to eliminate rivals in their environmental niches. Here we show that the plant root colonizer Pseudomonas putida strain IsoF is able to kill a wide range of soil and plant-associated Gram-negative bacteria with the aid of a type IVB secretion system (T4BSS) that delivers a toxic effector into bacterial competitors in a contact-dependent manner. This extends the range of targets of T4BSSs-so far thought to transfer effectors only into eukaryotic cells-to prokaryotes. Bioinformatic and genetic analyses showed that this killing machine is entirely encoded by the kib gene cluster located within a rare genomic island, which was recently acquired by horizontal gene transfer. P. putida IsoF utilizes this secretion system not only as a defensive weapon to kill bacterial competitors but also as an offensive weapon to invade existing biofilms, allowing the strain to persist in its natural environment. Furthermore, we show that strain IsoF can protect tomato plants against the phytopathogen Ralstonia solanacearum in a T4BSS-dependent manner, suggesting that IsoF can be exploited for pest control and sustainable agriculture.

Indexed as

Pseudomonas putidaRalstonia solanacearumSolanum lycopersicumBiofilmsSoilSoil

Identifiers

PMID36123439
PMCPMC9519443

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.