Evidence map›Paper›PMID 36123433›Full record

ArticleCommunications biology2022

Stretching muscle cells induces transcriptional and splicing transitions and changes in SR proteins.

Emma R Hinkle, R Eric Blue, Yi-Hsuan Tsai, Matthew Combs, Jacquelyn Davi, Alisha R Coffey, Aladin M Boriek, Joan M Taylor, Joel S Parker, Jimena Giudice

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Communications biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Mechanical Loading Induces Distinct and Shared Responses in Endothelial and Muscle Cells and Reveals Exercise-Like Molecular Profiles.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Emma R HinkleDepartment of Cell Biology and Physiology, The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA.ORCID http://orcid.org/0000-0002-7396-7525
R Eric BlueDepartment of Cell Biology and Physiology, The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA.ORCID http://orcid.org/0000-0002-9774-6778
Yi-Hsuan TsaiLineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA.ORCID http://orcid.org/0000-0003-2107-4300
Matthew CombsDepartment of Pathology and Laboratory Medicine, The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA.
Jacquelyn DaviDepartment of Cell Biology and Physiology, The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA.
Alisha R CoffeyLineberger Comprehensive Cancer Center, The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA.
Aladin M BoriekDepartment of Medicine, Baylor College of Medicine, Houston, TX, USA.
Joan M TaylorDepartment of Pathology and Laboratory Medicine, The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA.ORCID http://orcid.org/0000-0002-8794-5167
Joel S ParkerCurriculum in Genetics and Molecular Biology (GMB), The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA.
Jimena GiudiceDepartment of Cell Biology and Physiology, The University of North Carolina at Chapel Hill, Chapel Hill, 27599, NC, USA. jimena_giudice@med.unc.edu.ORCID http://orcid.org/0000-0002-3330-7784
University of North Carolina at Chapel Hill · USBaylor College of Medicine · US

Funding

Virology Research Program (Program 4)P30CA016086 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Deborah F. Tate · 1985 to 2026
$201.5M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Hazel B Nichols · 2001 to 2026
$36.3M
NRSA IN GENETICST32GM007092 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SEKELSKY, JEFF J. · 1985 to 2019
$5.9M
NRSA in GeneticsT32GM135128 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Daniel J McKay, JEFF J. SEKELSKY · 2020 to 2026
$5.1M
Molecular Control of Cardiomyocyte Mitophagy by the RhoGAP GRAF1R01HL142879 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TAYLOR, JOAN M · 2020 to 2023
$1.8M
Equipment -NEON transfection equipmentR01GM130866 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GIUDICE, JIMENA · 2019 to 2023
$1.6M
A role for GRAF1 in mitochondrial clearance and perinatal metabolic reprogrammingF31HL145983 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COMBS, MATTHEW ELWOOD · 2019 to 2021
$107k
Alternative Splicing Regulation and Mechanotransduction in Skeletal MuscleF31AR077381 · NIAMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HINKLE, EMMA · 2021 to 2022
$66k
NCI NIH HHS P30 CA016086NHLBI NIH HHS F31 HL145983NHLBI NIH HHS R01 HL142879NIAMS NIH HHS F31 AR077381NIEHS NIH HHS P30 ES010126NIGMS NIH HHS R01 GM130866NIGMS NIH HHS T32 GM007092NIGMS NIH HHS T32 GM135128
6 · The paper itself

Abstract

Alternative splicing is an RNA processing mechanism involved in skeletal muscle development and pathology. Muscular diseases exhibit splicing alterations and changes in mechanobiology leading us to investigate the interconnection between mechanical forces and RNA processing. We performed deep RNA-sequencing after stretching muscle cells. First, we uncovered transcriptional changes in genes encoding proteins involved in muscle function and transcription. Second, we observed that numerous mechanosensitive genes were part of the MAPK pathway which was activated in response to stretching. Third, we revealed that stretching skeletal muscle cells increased the proportion of alternatively spliced cassette exons and their inclusion. Fourth, we demonstrated that the serine and arginine-rich proteins exhibited stronger transcriptional changes than other RNA-binding proteins and that SRSF4 phosphorylation is mechanosensitive. Identifying SRSF4 as a mechanosensitive RNA-binding protein that might contribute to crosstalk between mechanotransduction, transcription, and splicing could potentially reveal novel insights into muscular diseases, particularly those with unknown etiologies.

Indexed as

Mechanotransduction, CellularRNA-Binding ProteinsArginineMuscle CellsRNASerineArginineRNARNA-Binding ProteinsSerine

Identifiers

PMID36123433
PMCPMC9485123
OpenAlexW4296657787

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.