Evidence map›Paper›PMID 36122287›Full record

ArticleBiomedica : revista del Instituto Nacional de Salud2022

Phylogeny and antimicrobial resistance of extended-spectrum beta-lactamaseproducing Escherichia coli from hospitalized oncology patients in Perú

Jose Matta-Chuquisapon, Esther Valencia-Bazalar, Carlos Sevilla-Andrade, Helí Jaime Barrón-Pastor

Open access · diamondAbstract read
In one paragraph

Article in Biomedica : revista del Instituto Nacional de Salud, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 55% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Prevalence and antimicrobial resistance ofJournal of preventive medicine and hygiene · 2026
    Article
  2. Factors Associated With the Antimicrobial Resistance Profile of UropathogenicInterdisciplinary perspectives on infectious diseases · 2026
    Article
  3. Phylogenetic Analysis ofInfection & chemotherapy · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jose Matta-ChuquisaponGrupo de Investigación Resistencia a los Antimicrobianos, Universidad Nacional Mayor de San Marcos, Lima, Perú. jose.matta@unmsm.edu.pe.
Esther Valencia-BazalarGrupo de Investigación Resistencia a los Antimicrobianos, Universidad Nacional Mayor de San Marcos, Lima, Perú. evalbaz@gmail.com.
Carlos Sevilla-AndradeGrupo de Investigación Resistencia a los Antimicrobianos, Universidad Nacional Mayor de San Marcos, Lima, Perú; Centro de Investigaciones Tecnológicas, Biomédicas y Medioambientales, Universidad Nacional Mayor de San Marcos, Lima, Perú. crsevillaa@gmail.com.
Helí Jaime Barrón-PastorGrupo de Investigación Resistencia a los Antimicrobianos, Universidad Nacional Mayor de San Marcos, Lima, Perú; Centro de Investigación de Bioquímica y Nutrición "Alberto Guzmán Barrón", Universidad Nacional Mayor de San Marcos, Lima, Perú. helibarron@unmsm.edu.pe.
National University of San Marcos · PE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Healthcare-associated infections are a public health problem due to the increased morbimortality of patients, especially those with risk factors such as immunosuppression due to oncological diseases. It is essential to determine the genetic diversity of the main microorganisms causing healthcare infections by combining traditional epidemiological surveillance and molecular epidemiology for better outbreak follow-up and early detection. Objective: To determine the phylogenetic group and antibiotic resistance of Escherichia coli isolated from hospitalized oncologic patients. Materials and methods: We conducted a cross-sectional study of 67 strains of ESBL-producing Escherichia coli to determine their phylogenetic group and described their antibiotic resistance profile, beta-lactam resistance genes, as well as the type of sample and the hospitalization areas from which they were recovered. Results: The most frequent phylogenetic group was B2 (36%); 57% of B2 strains were isolated from urine and 33% came from the urology department. Resistance to ciprofloxacin and gentamicin was 92% and 53%, respectively, and 79% of the strains had the blaCTX-M gene. A significant association (p<0.05) was found between the phylogenetic groups, ciprofloxacin resistance, and the age of the patients. Conclusion: The predominant E. coli phylogroup was B2. We evidenced high resistance to ciprofloxacin and gentamicin, a high proportion of ESBL strains with the blaCTX-M gene, and a significant association between the phylogenetic group and the resistance to ciprofloxacin.

Indexed as

Escherichia coli InfectionsNeoplasmsAnti-Bacterial Agentsbeta-LactamasesCiprofloxacinCross-Sectional StudiesDrug Resistance, BacterialEscherichia coliGentamicinsHumansPeruPhylogenyAnti-Bacterial Agentsbeta-LactamasesCiprofloxacinGentamicinsbeta-lactam resistanceciprofloxacinEscherichia coligentamicinsphylogeny

Identifiers

PMID36122287
PMCPMC9536847
OpenAlexW4296297658

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.