Evidence map›Paper›PMID 36121025›Full record

ArticleThe EMBO journal2022

Enzyme-substrate interface targeting by imidazole-based γ-secretase modulators activates γ-secretase and stabilizes its interaction with APP.

Dieter Petit, Manuel Hitzenberger, Matthias Koch, Sam Lismont, Katarzyna Marta Zoltowska, Thomas Enzlein, Carsten Hopf, Martin Zacharias, Lucía Chávez-Gutiérrez

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Dieter Petit *VIB-KU Leuven Center for Brain & Disease Research, Leuven, Belgium.ORCID 0000-0001-5721-8041
Manuel Hitzenberger *Center for Functional Protein Assemblies, Theoretical Biophysics (T38), Technical University of Munich, Garching, Germany.ORCID 0000-0001-9726-2370
Matthias KochVIB-KU Leuven Center for Brain & Disease Research, Leuven, Belgium.ORCID 0000-0003-1015-1577
Sam LismontVIB-KU Leuven Center for Brain & Disease Research, Leuven, Belgium.
Katarzyna Marta ZoltowskaVIB-KU Leuven Center for Brain & Disease Research, Leuven, Belgium.ORCID 0000-0001-5853-3465
Thomas EnzleinVIB-KU Leuven Center for Brain & Disease Research, Leuven, Belgium.ORCID 0000-0003-1789-4090
Carsten HopfCenter for Mass Spectrometry and Optical Spectroscopy (CeMOS), Mannheim University of Applied Sciences, Mannheim, Germany.ORCID 0000-0003-0802-6451
Martin ZachariasCenter for Functional Protein Assemblies, Theoretical Biophysics (T38), Technical University of Munich, Garching, Germany.ORCID 0000-0001-5163-2663
Lucía Chávez-GutiérrezVIB-KU Leuven Center for Brain & Disease Research, Leuven, Belgium.ORCID 0000-0002-8239-559X
VIB-KU Leuven Center for Brain & Disease Research · BETechnical University of Munich · DETechnische Hochschule Mannheim · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alzheimer's disease (AD) pathogenesis has been linked to the accumulation of longer, aggregation-prone amyloid β (Aβ) peptides in the brain. Γ-secretases generate Aβ peptides from the amyloid precursor protein (APP). Γ-secretase modulators (GSMs) promote the generation of shorter, less-amyloidogenic Aβs and have therapeutic potential. However, poorly defined drug-target interactions and mechanisms of action have hampered their therapeutic development. Here, we investigate the interactions between the imidazole-based GSM and its target γ-secretase-APP using experimental and in silico approaches. We map the GSM binding site to the enzyme-substrate interface, define a drug-binding mode that is consistent with functional and structural data, and provide molecular insights into the underlying mechanisms of action. In this respect, our analyses show that occupancy of a γ-secretase (sub)pocket, mediating binding of the modulator's imidazole moiety, is sufficient to trigger allosteric rearrangements in γ-secretase as well as stabilize enzyme-substrate interactions. Together, these findings may facilitate the rational design of new modulators of γ-secretase with improved pharmacological properties.

Indexed as

Alzheimer DiseaseAmyloid Precursor Protein SecretasesAmyloid beta-PeptidesAmyloid beta-Protein PrecursorGamma Secretase Inhibitors and ModulatorsHumansImidazolesAmyloid beta-PeptidesAmyloid beta-Protein PrecursorAmyloid Precursor Protein SecretasesGamma Secretase Inhibitors and ModulatorsImidazolesAlzheimer's diseaseamyloid precursor proteinamyloid βpreselininγ-secretaseγ-secretase modulators

Identifiers

PMID36121025
PMCPMC9627667
OpenAlexW4296331183

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.