Evidence map›Paper›PMID 36120601›Full record

ArticleOxidative medicine and cellular longevity2022

Possible Involvement of DNA Methylation in TSC1 Gene Expression in Neuroprotection Induced by Hypoxic Preconditioning.

Ruifang Qi, Yabin Xie, Xiaolu Zhang, Shuyuan Jiang, Xiaolei Liu, Wei Xie, Xiaoe Jia, Rengui Bade, You Liu, Kerui Gong and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Oxidative medicine and cellular longevity, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Ruifang QiDepartment of Basic Medicine and Forensic Medicine, Baotou Medical College of Inner Mongolia University of Science and Technology, Baotou, China.ORCID https://orcid.org/0000-0001-8105-469X
Yabin XieInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.
Xiaolu ZhangInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.
Shuyuan JiangInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.
Xiaolei LiuInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.
Wei XieInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.ORCID https://orcid.org/0000-0001-6744-4827
Xiaoe JiaInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.
Rengui BadeInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.
You LiuInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.
Kerui GongDepartment of Oral and Maxillofacial Surgery, University of California san Francisco, San Francisco, USA.
Wenjie YangInner Mongolia Key Laboratory of Hypoxic Translational Medicine, Baotou Medical College, Baotou, China.
Guanghui GuoCenter for Translational Medicine and Department of Laboratory Medicine, The Third People's Hospital of Longgang District, Shenzhen, China.
Kai SunCenter for Translational Medicine and Department of Laboratory Medicine, The Third People's Hospital of Longgang District, Shenzhen, China.
Chunyang ZhangDepartment of Neurosurgery, The First Affiliated Hospital of Baotou Medical College, Inner Mongolia, China.ORCID https://orcid.org/0000-0001-8281-4654
Ruijuan HanDepartment of Cardiology, The People's Hospital of Longgang District, Shenzhen, China.ORCID https://orcid.org/0000-0002-1222-9078
Guo ShaoCenter for Translational Medicine and Department of Laboratory Medicine, The Third People's Hospital of Longgang District, Shenzhen, China.ORCID https://orcid.org/0000-0003-3766-5076
Capital Medical University · CNBaotou Medical College · CNShenzhen Third People’s Hospital · CNLonggang Central Hospital · CNUniversity of California, San Francisco · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: It has been reported that ischemia and ischemic preconditioning (IPC) have different effects on the expression of tuberous sclerosis complex 1 (TSC1), which may contribute to the tolerance to ischemia/hypoxia with the increase of autophagy. The mechanisms of TSC1 differential expression are still unclear under ischemia/IPC conditions in hippocampal Cornu Ammon 1 (CA1) and Cornu Ammon 3 (CA3) area neuronal cells. While we have shown that 5-Aza-CdR, a DNA methyltransferase inhibitor, can upregulate TSC1 and increase hypoxic tolerance by autophagy in vivo and in vitro, in this study, we examined whether DNA methylation was involved in the differential expression of TSC1 in the CA1 and CA3 regions induced by hypoxic preconditioning (HPC). Methods: Level of rapamycin (mTOR) autophagy, a downstream molecular pathway of TSC1/TSC2 complex, was detected in HPC mouse hippocampal CA1 and CA3 areas as well as in the HPC model of mouse hippocampal HT22 cells. DNA methylation level of TSC1 promoter (-720 bp~ -360 bp) was determined in CA1 and CA3 areas by bisulfite-modified DNA sequencing (BMDS). At the same time, autophagy was detected in HT22 cells transfected with GFP-LC3 plasmid. The role of TSC1 in neuroprotection was measured by cell viability and apoptosis, and the role of TSC1 in metabolism was checked by ATP assay and ROS assay in HT22 cells that overexpressed/knocked down TSC1. Results: HPC upregulated the expression of TSC1, downregulated the level of P-mTOR (Ser2448) and P-p70S6K (Thr389), and enhanced the activity of autophagy in both in vivo and in vitro. The increased expression of TSC1 in HPC may depend on its DNA hypomethylation in the promoter region in vivo. HPC also could reduce energy consumption in HT22 cells. Overexpression and knockdown of TSC1 can affect cell viability, cell apoptosis, and metabolism in HT22 cells exposed to hypoxia. Conclusion: TSC1 expression induced by HPC may relate to the downregulation of its DNA methylation level with the increase of autophagy and the decrease of energy demand.

Indexed as

NeuroprotectionRibosomal Protein S6 Kinases, 70-kDaAdenosine TriphosphateAnimalsDNA MethylationGene ExpressionHypoxiaMethyltransferasesMiceReactive Oxygen SpeciesSirolimusTOR Serine-Threonine KinasesAdenosine TriphosphateMethyltransferasesReactive Oxygen SpeciesRibosomal Protein S6 Kinases, 70-kDaSirolimusTOR Serine-Threonine Kinases

Identifiers

PMID36120601
PMCPMC9481362
OpenAlexW4295048284

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.