Evidence map›Paper›PMID 36119807›Full record

ArticleMetabolic engineering communications2022

A targeted metabolomics method for extra- and intracellular metabolite quantification covering the complete monolignol and lignan synthesis pathway.

Andrea Steinmann, Katrin Schullehner, Anna Kohl, Christina Dickmeis, Maurice Finger, Georg Hubmann, Guido Jach, Ulrich Commandeur, Marco Girhard, Vlada B Urlacher and 1 more

Open access · goldAbstract read
In one paragraph

Article in Metabolic engineering communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Andrea SteinmannChair for Bioprocess Engineering, TU Dortmund University, Emil-Figge-Straße 66, 44227, Dortmund, Germany.
Katrin SchullehnerPhytowelt GreenTechnologies GmbH, Kölsumer Weg 33, 41334, Nettetal, Germany.
Anna KohlInstitute of Molecular Biotechnology, RWTH Aachen University, Kackertstraße 9, 52072, Aachen, Germany.
Christina DickmeisInstitute of Molecular Biotechnology, RWTH Aachen University, Kackertstraße 9, 52072, Aachen, Germany.
Maurice FingerChair for Bioprocess Engineering, TU Dortmund University, Emil-Figge-Straße 66, 44227, Dortmund, Germany.
Georg HubmannChair for Bioprocess Engineering, TU Dortmund University, Emil-Figge-Straße 66, 44227, Dortmund, Germany.
Guido JachPhytowelt GreenTechnologies GmbH, Kölsumer Weg 33, 41334, Nettetal, Germany.
Ulrich CommandeurInstitute of Molecular Biotechnology, RWTH Aachen University, Kackertstraße 9, 52072, Aachen, Germany.
Marco GirhardInstitute of Biochemistry, Heinrich-Heine University, Universitätsstraße 1, 40225 Düsseldorf, Germany.
Vlada B UrlacherInstitute of Biochemistry, Heinrich-Heine University, Universitätsstraße 1, 40225 Düsseldorf, Germany.
Stephan LützChair for Bioprocess Engineering, TU Dortmund University, Emil-Figge-Straße 66, 44227, Dortmund, Germany.
TU Dortmund University · DERWTH Aachen University · DEHeinrich Heine University Düsseldorf · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microbial synthesis of monolignols and lignans from simple substrates is a promising alternative to plant extraction. Bottlenecks and byproduct formation during heterologous production require targeted metabolomics tools for pathway optimization. In contrast to available fractional methods, we established a comprehensive targeted metabolomics method. It enables the quantification of 17 extra- and intracellular metabolites of the monolignol and lignan pathway, ranging from amino acids to pluviatolide. Several cell disruption methods were compared. Hot water extraction was best suited regarding monolignol and lignan stability as well as extraction efficacy. The method was applied to compare enzymes for alleviating bottlenecks during heterologous monolignol and lignan production in

Indexed as

Heterologous productionLignansMetabolic engineeringMetabolite extractionMethod developmentTargeted metabolomics

Identifiers

PMID36119807
PMCPMC9474286
OpenAlexW4293801678

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.