Evidence map›Paper›PMID 36118668›Full record

ArticleDisease markers2022

Multiomics Immune-Related lncRNA Analysis of Oral Squamous Cell Carcinoma and Its Correlation with Prognosis.

Zhen Liu, Qian Liu, Xiaoyu Wang, Lin Liu, Lianrui Shi, Hongbo Li

RetractedOpen access · hybridAbstract readRetracted Publication
In one paragraph

Article in Disease markers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Zhen LiuDepartment of Stomatology, The Eighth Medical Center, Chinese PLA General Hospital, China.ORCID https://orcid.org/0000-0002-1500-1757
Qian LiuDepartment of Stomatology, The First Medical Center, Chinese PLA General Hospital, China.ORCID https://orcid.org/0000-0003-2838-5670
Xiaoyu WangDepartment of Stomatology, The First Medical Center, Chinese PLA General Hospital, China.ORCID https://orcid.org/0000-0002-9238-5977
Lin LiuDepartment of Stomatology, The First Medical Center, Chinese PLA General Hospital, China.ORCID https://orcid.org/0000-0002-6049-1708
Lianrui ShiDepartment of Stomatology, The Sixth Medical Center, Chinese PLA General Hospital, China.ORCID https://orcid.org/0000-0003-2838-6139
Hongbo LiDepartment of Stomatology, The First Medical Center, Chinese PLA General Hospital, China.ORCID https://orcid.org/0000-0002-8845-1329
Chinese PLA General Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: To investigate the multiomics immune-related lncRNA analysis of oral squamous cell carcinoma and its correlation with prognosis. Methods: Through the bioinformatics database, a total of 346 oral squamous cell carcinoma (OSCC) related samples were retrieved. Bioinformatics analysis screened out the difference lncRNAs in the sample tissue and normal tissue, combined with literature research to clarify the target. The biological functions of differentially expressed lncRNAs were predicted. The differential expression network of differentially expressed lncRNAs and mRNAs was established. The correlation analysis software was used to analyze the correlation between oral squamous cell carcinoma multiomics immune-related lncRNA and prognosis. Results: 3054 lncRNAs in OSCC tissues are highly correlated with immune genes. 76 immune-related lncRNAs were different in tumor and adjacent tissues. Cancer Hallmark, Phenotype, and Subcellular Location analysis were completed. The results showed that lncRNAs can participate in tumor cell invasion, metastasis, proliferation, and apoptosis. Select the 15 most important lncRNAs above, draw Kaplan-Meier curve to complete the survival curve analysis, and complete the analysis and arrangement of the relevant data. LINC00460, CASC9, and HCG22 were screened for subsequent analysis. Complete the GO and KEGG enrichment analysis. LINC00460, CASC9, and macrophages M0 are positively correlated; CASC9 is negatively correlated with macrophages M1; LINC00460 is positively correlated with macrophages M1; HCG22 is associated with mast cells resting positive correlation; LINC00460 was negatively correlated with mast cell resting. CASC9 and HCG22 were significantly correlated with the age and stage of OSCC patients; 2 key lncRNA and 79 miRNAs were extracted from the database, to complete 86 pairs of interactions; the target mRNAs were predicted based on the above miRNAs. A total of 631 pairs of interactions were predicted (including 21 miRNAs and 562 mRNAs), and the regulatory mechanism of key gene ceRNA network was constructed. Conclusion: The differential expression of multiple lncRNAs and mRNAs was screened, and the downregulated lncRNAs were more than the upregulated lncRNAs. The lncRNA LINC00460, CASC9, and HCG22 had a strong correlation with prognosis.

Indexed as

Carcinoma, Squamous CellHead and Neck NeoplasmsMicroRNAsMouth NeoplasmsRNA, Long NoncodingHumansPrognosisRNA, MessengerSquamous Cell Carcinoma of Head and NeckMicroRNAsRNA, Long NoncodingRNA, Messenger

Identifiers

PMID36118668
PMCPMC9477588
OpenAlexW4295181047

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.