Evidence map›Paper›PMID 36115975›Full record

ArticleVirology journal2022

Ultrasensitive and visual detection of human norovirus genotype GII.4 or GII.17 using CRISPR-Cas12a assay.

Weidong Qian, Jie Huang, Ting Wang, Cheng Fan, Jie Kang, Qian Zhang, Yongdong Li, Si Chen

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Weidong QianSchool of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an, 710021, People's Republic of China.
Jie HuangSchool of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an, 710021, People's Republic of China.
Ting WangSchool of Food and Biological Engineering, Shaanxi University of Science and Technology, Xi'an, 710021, People's Republic of China.
Cheng FanShaanxi Testing Institute of Product Quality Supervision, Xi'an, 710048, People's Republic of China.
Jie KangShaanxi Testing Institute of Product Quality Supervision, Xi'an, 710048, People's Republic of China.
Qian ZhangDepartment of Dermatology, Huazhong University of Science and Technology Union Shenzhen Hospital, Shenzhen, 518052, People's Republic of China.
Yongdong LiNingbo Municipal Center for Disease Control and Prevention, Ningbo, 315010, People's Republic of China. liyd0551@126.com.
Si ChenShenzhen University Health Science Center, Shenzhen, 518060, People's Republic of China. chensi@szu.edu.cn.
Shaanxi University of Science and Technology · CNGuangdong Testing Institute for Product Quality Supervision · CNHuazhong University of Science and Technology · CNNingbo Center for Disease Control and Prevention · CNShenzhen University Health Science Center · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIntegrating CRISPR-Cas12a sensors with isothermal signal amplification can be exploited to develop low-cost, disposable, and ultrasensitive assays for the diagnostics of human pathogens.

methodsRT-RAA-Cas12a-mediated real-time or end-point fluorescent and lateral flow strip (LFS) assays for direct detection of norovirus (NOV) genotype GII.4 or GII.17 were explored.

resultsThe results showed that our RT-RAA-Cas12a-mediated fluorescent and LFS assay could detect NOV GII.4 or GII.17 by targeting the viral protein 1 gene. Our RT-RAA-Cas12a-mediated fluorescent and LFS assay can specifically detect NOV GII.4 or GII.17 with no cross-reactivity for other related viruses. The low limit of detection could reach 0.1 copies/μL within approximately 30-40 min, and the results were visualized using an ultraviolet light illuminator or on a LFS without complex equipment. In addition, our RT-RAA-Cas12a-mediated fluorescent and LFS assay provided a visual and faster alternative to real-time RT-PCR assay, with 95.7% and 94.3% positive predictive agreement and 100% negative predictive agreement.

conclusionsTogether, our RT-RAA-Cas12a-mediated approach would have a great potential for point-of-care diagnostics of NOV GII.4 and/or GII.17 in resource-limited settings.

Indexed as

Caliciviridae InfectionsNorovirusCRISPR-Cas SystemsGenotypeHumansSensitivity and SpecificityViral ProteinsViral ProteinsCRISPR-Cas12aDiagnosticsGII.4 or GII.17Human norovirusRT-RAA

Identifiers

PMID36115975
PMCPMC9482751
OpenAlexW4296185555

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.