Evidence map›Paper›PMID 36114880›Full record

ArticleArchives of microbiology2022

Heterogeneity in the spontaneous induction of the promoter of the ColE9 operon in Escherichia coli.

Shaista Bano, Mireille Vankemmelbeke, Christopher N Penfold, Sarfraz A Tunio, Richard James

Abstract read
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In one paragraph

Article in Archives of microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.4field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Shaista BanoSchool of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK. shaista.bano@usindh.edu.pk.ORCID http://orcid.org/0000-0002-1935-893X
Mireille VankemmelbekeSchool of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Christopher N PenfoldSchool of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Sarfraz A TunioInstitute of Microbiology, University of Sindh, Allama I. I Qazi campus, Jamshoro, 76080, Pakistan.
Richard JamesSchool of Life Sciences, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
University of Nottingham · GBUniversity of Sindh · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spontaneous production of E colicins is known to occur in only a small fraction of colicinogenic population. The current study aimed to determine if the same holds true for the production of colicin E9 in real time, by investigating the induction dynamics of the promoter of the ColE9 operon which results in the expression of the ColE9 activity and functional genes. A novel fluorescent reporter was constructed which carries the fusion of the ColE9 promoter and the gfpmut2 gene in a low copy number plasmid that was compatible with the native ColE9-J plasmid. Using the fluorescent reporter construct in the non colicinogenic E. coli cells, the induction of the ColE9 promoter was investigated. The current study demonstrates that the spontaneous induction of the ColE9 promoter occurs in a heterogenous manner and this heterogeneity is maintained in a bacterial population for several generations suggesting that it is unlikely due to any irreversible mutation in the bacterial culture. Furthermore, the same investigations were repeated using the colicin E9 producing E. coli cells. Flow cytometry analysis revealed that 7.1 ± 0.68% of the colicin E9 producing E. coli cells expressed GFP albeit only 2.45 ± 0.30% was observed from non colicinogenic E. coli cells. The considerable increase in the number of the fluorescent cells was likely due to the DNase activity of colicin E9 produced by their clonemates, resulting the auto-induction, which can be abolished with the inactivation of the DNase activity of the colicin E9.

Indexed as

ColicinsEscherichia coli InfectionsEscherichia coli ProteinsDeoxyribonucleasesEscherichia coliHumansOperonColicinsDeoxyribonucleasesEscherichia coli ProteinsAutoinductionColE9 operonColicinGreen fluorescent proteinSOS promoter

Identifiers

PMID36114880
OpenAlexW4296162423

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.