Evidence map›Paper›PMID 36114209›Full record

ArticleNature communications2022

Clustering by measuring local direction centrality for data with heterogeneous density and weak connectivity.

Dehua Peng, Zhipeng Gui, Dehe Wang, Yuncheng Ma, Zichen Huang, Yu Zhou, Huayi Wu

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
  2. Article
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  5. FLASC: a flare-sensitive clustering algorithm.PeerJ. Computer science · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Grid-Based Clustering Using Boundary Detection.Entropy (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Dehua PengState Key Laboratory of Information Engineering in Surveying, Mapping and Remote Sensing, Wuhan University, Wuhan, China.ORCID http://orcid.org/0000-0002-9842-0796
Zhipeng GuiSchool of Remote Sensing and Information Engineering, Wuhan University, Wuhan, China. zhipeng.gui@whu.edu.cn.ORCID http://orcid.org/0000-0001-9467-9680
Dehe WangState Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, China.ORCID http://orcid.org/0000-0002-9465-0957
Yuncheng MaSchool of Remote Sensing and Information Engineering, Wuhan University, Wuhan, China.
Zichen HuangSchool of Remote Sensing and Information Engineering, Wuhan University, Wuhan, China.
Yu ZhouState Key Laboratory of Virology, Modern Virology Research Center, College of Life Sciences, Wuhan University, Wuhan, China.ORCID http://orcid.org/0000-0002-2102-9377
Huayi WuState Key Laboratory of Information Engineering in Surveying, Mapping and Remote Sensing, Wuhan University, Wuhan, China.
Wuhan University · CNWuhan University of Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clustering is a powerful machine learning method for discovering similar patterns according to the proximity of elements in feature space. It is widely used in computer science, bioscience, geoscience, and economics. Although the state-of-the-art partition-based and connectivity-based clustering methods have been developed, weak connectivity and heterogeneous density in data impede their effectiveness. In this work, we propose a boundary-seeking Clustering algorithm using the local Direction Centrality (CDC). It adopts a density-independent metric based on the distribution of K-nearest neighbors (KNNs) to distinguish between internal and boundary points. The boundary points generate enclosed cages to bind the connections of internal points, thereby preventing cross-cluster connections and separating weakly-connected clusters. We demonstrate the validity of CDC by detecting complex structured clusters in challenging synthetic datasets, identifying cell types from single-cell RNA sequencing (scRNA-seq) and mass cytometry (CyTOF) data, recognizing speakers on voice corpuses, and testifying on various types of real-world benchmarks.

Indexed as

AlgorithmsCluster AnalysisSequence Analysis, RNA

Identifiers

PMID36114209
PMCPMC9481560
OpenAlexW4295996379

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.