Evidence map›Paper›PMID 36113466›Full record

ArticleCell2022

Group II intron-like reverse transcriptases function in double-strand break repair.

Seung Kuk Park, Georg Mohr, Jun Yao, Rick Russell, Alan M Lambowitz

Open access · greenAbstract read
In one paragraph

Article in Cell, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 25 citations in OpenAlex.

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  7. Identification of candidate nucleomodulins in ESKAPE bacteria -Frontiers in cellular and infection microbiology · 2026
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  16. De novo gene synthesis by an antiviral reverse transcriptase.bioRxiv : the preprint server for biology · 2024
    Article
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  19. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Seung Kuk ParkDepartments of Molecular Biosciences and Oncology, University of Texas at Austin, Austin, TX 78712, USA.
Georg MohrDepartments of Molecular Biosciences and Oncology, University of Texas at Austin, Austin, TX 78712, USA.
Jun YaoDepartments of Molecular Biosciences and Oncology, University of Texas at Austin, Austin, TX 78712, USA.
Rick RussellDepartments of Molecular Biosciences and Oncology, University of Texas at Austin, Austin, TX 78712, USA.
Alan M LambowitzDepartments of Molecular Biosciences and Oncology, University of Texas at Austin, Austin, TX 78712, USA. Electronic address: lambowitz@austin.utexas.edu.
The University of Texas at Austin · US

Funding

Group II Intron and Related Reverse TranscriptasesR35GM136216 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI ALAN M. LAMBOWITZ · 2020 to 2026
$6.0M
Mechanisms and Specificity of Proteins that Manipulate DNA and RNA StructureR35GM131777 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Rick Russell · 2019 to 2026
$3.2M
NIGMS NIH HHS R35 GM131777NIGMS NIH HHS R35 GM136216
6 · The paper itself

Abstract

Bacteria encode reverse transcriptases (RTs) of unknown function that are closely related to group II intron-encoded RTs. We found that a Pseudomonas aeruginosa group II intron-like RT (G2L4 RT) with YIDD instead of YADD at its active site functions in DNA repair in its native host and when expressed in Escherichia coli. G2L4 RT has biochemical activities strikingly similar to those of human DNA repair polymerase θ and uses them for translesion DNA synthesis and double-strand break repair (DSBR) via microhomology-mediated end-joining (MMEJ). We also found that a group II intron RT can function similarly in DNA repair, with reciprocal active-site substitutions showing isoleucine favors MMEJ and alanine favors primer extension in both enzymes. These DNA repair functions utilize conserved structural features of non-LTR-retroelement RTs, including human LINE-1 and other eukaryotic non-LTR-retrotransposon RTs, suggesting such enzymes may have inherent ability to function in DSBR in a wide range of organisms.

Indexed as

RetroelementsRNA-Directed DNA PolymeraseAlanineDNA-Directed RNA PolymerasesDNA End-Joining RepairDNA RepairHumansIntronsIsoleucineAlanineDNA-Directed RNA PolymerasesIsoleucineRetroelementsRNA-Directed DNA PolymeraseAlt-EJalternative end joiningDNA repair polymerasehigh-throughput sequencinginsect R2 elementnon-retroviral reverse transcriptasetargetronthermostable group II intron reverse transcriptase

Identifiers

PMID36113466
PMCPMC9530004
OpenAlexW4295948234

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.