Evidence map›Paper›PMID 36113119›Full record

ReviewExperimental biology and medicine (Maywood, N.J.)2022

The continuing evolution of barcode applications: Functional toxicology to cell lineage.

Michael Fasullo, Michael Dolan

Open access · greenAbstract readReview
In one paragraph

Review in Experimental biology and medicine (Maywood, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. The therapeutic bionanoscience interface.Experimental biology and medicine (Maywood, N.J.) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Michael FasulloCollege of Nanoscale Science and Engineering, SUNY Polytechnic Institute, Albany, NY 12203, USA.ORCID 0000-0003-4327-6907
Michael DolanCollege of Nanoscale Science and Engineering, SUNY Polytechnic Institute, Albany, NY 12203, USA.ORCID 0000-0002-6259-1630
SUNY Polytechnic Institute · US

Funding

Genomic profiling of yeast resistance to heterocylic aromatic aminesR15ES023685 · NIEHS · SUNY POLYTECHNIC INSTITUTE · PI FASULLO, MICHAEL THOMAS · 2014 to 2019
$903k
NIEHS NIH HHS R15 ES023685
6 · The paper itself

Abstract

DNA barcoding is a method to identify biological entities, including individual cells, tissues, organs, or species, by unique DNA sequences. With the advent of next generation sequencing (NGS), there has been an exponential increase in data acquisition pertaining to medical diagnosis, genetics, toxicology, ecology, cancer, and developmental biology. While barcoding first gained wide access in identifying species, signature tagged mutagenesis has been useful in elucidating gene function, particularly in microbes. With the advent of CRISPR/CAS9, methodology to profile eukaryotic genes has made a broad impact in toxicology and cancer biology. Designed homing guide RNAs (hgRNAs) that self-target DNA sequences facilitate cell lineage barcoding by introducing stochastic mutations within cell identifiers. While each of these applications has their limitations, the potential of sequence barcoding has yet to be realized. This review will focus on signature-tagged mutagenesis and briefly discuss the history of barcoding, experimental problems, novel detection methods, and future directions.

Indexed as

DNADNA Barcoding, TaxonomicCell LineageMutationDNABarcodingcell lineagegenome profilingnanobiosciencenext generation sequencingtoxicology

Identifiers

PMID36113119
PMCPMC9837303
OpenAlexW4296058439

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.